Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02786 ATGGAAAAGGCAATGAGAGAGAGATGTCTCATTGGAAGACATGAAACTGCAGATATCAACACCTTCTCTTTGTTATCACTTAAATCATTGGTTGAATGCCTGAATCACGAGAGTTTGAGAGTTGGGGAGGAGATACTGAATGATGCGTTGAGGAGTATGGTGAATGCAGAGAAGAGAGGGAAAAGTATGGTGGAACTCAAGCCAATCTCCACTGTTATGTCTTCCTTTCTCCGCATCATGAAATACCATGGGTATATCAAGGACTTTCAAGTCTATGATCCGCAGAGTGGGGAGGATAATGATTGA 306 0.4216 MEKAMRERCLIGRHETADINTFSLLSLKSLVECLNHESLRVGEEILNDALRSMVNAEKRGKSMVELKPISTVMSSFLRIMKYHGYIKDFQVYDPQSGEDND 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02786 101 Gene3D - 41 99 - -
Pumo3g02786 101 PANTHER 40S RIBOSOMAL PROTEIN S15A 44 95 IPR000630 GO:0003735|GO:0005840|GO:0006412
Pumo3g02786 101 Pfam Ribosomal protein S8 45 92 IPR000630 GO:0003735|GO:0005840|GO:0006412
Pumo3g02786 101 SUPERFAMILY Ribosomal protein S8 45 95 IPR035987 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02786 Pumo-Chr3 47191384 47192317 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02786 41 94 Cytoplasmic Ribosomal Protein Gene Family AT4G29430 79.630 2.05e-26 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02786 K02957 - gmx:100306361 100.138