Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02784 ATGTCAAGGCATAGACATGAGCCATTTAGATTGACTTCACACAAAATTCATTTATTGAATAGGGAAGGATATGAATACGAGTTTATTCAGAAGATTGTTGAATTGGTCTCTAGCAAGATTAATCGTGCCCCTTTACCAGTTGCGGATTACCCAGTTGGACTAGAGTCACAAATGCTAGAAGTAAAGTCACTTATGGATGTTGGATCTGATGATGTCGTCCATATGGTAGGGTTCCATGGACTTGGTGGCATAGGTAAAACGACACTTGCTGTTGCAGTTTATAATTCCATTGCTGACCATTTTGAAGGTTTATGTTTTCTTGAAAATGTGAGAGAAACTTCAAACAAACATGGGTTACAATATCTCCAAAGCAACCTTCTTTATGAAACAGTTGGAGAAAAGGACATTAAGTTAACAAGTGTCAGACAAGGAATTTCCATTATACAACATAGGCTCCAACAAAAGAAGGTTCTTTTGATTCTAGATGATGTTGACAAACAGGAACAATTACAGTCAATTGTTGGAAGACCTGATTGGTTTGGTCCTGGCAGTAGAGTCATCATCACGACTCGGGACAAACAGTTGTTAGCTCGTCACGGTGTTAAAAGAATGTATGAGATGAAAGAATTGAATGAGGATGATGCTCTTCAATTACTTAGTTGGAAAGCTTTCAAATTGGAAAAAATTGATCCACATTATGAGGATGTTTTGAATCGAGCAGTTACTTATGCTTCGGGCCTTCCATTGGCTTTAGAAGTAATAGGTTCGAACTTATTTGGAAAAAATGTAGAACAATGGGAATCTGCTTTAACTCGATATGAAAGAATTCCTGATAAAACAATCCAAGAGATACTTAAAGTAAGCTATGATGCTTTGGAAGAAGATAAGCAAAGTGTTTTTCTTGACATAGCTTGTTGCTTCAAAGGATGTAAATTGGTAGAGGTCCAAGATATACTTCATGCTAATCATGGCAATGGTATGAAATATCATATTGGAGTGCTTGTTGAAAAATCTCTTATAAAGATTAATTGGTATGGTAGGGTGACACTACATGACTTGATAGAGGACATGGGTAAAGAAATTGTCAGGAAAGAATCACCAAACGAGCTTGGGAAACGTAGCAGGTTATGGTTCGCTAAGGATATAGTTCAAGTTTTAGAAGAAAATCAGGGAACTAGCCAGGTTGAAATCATTTTTATGGATTTTCCCTTATTTGAAGAAGAAGAAATAGAAGTAGAATGGGATGGAAATGCTTTCAACAAGATGAAAAATCTCAAAACACTTATTATTAGAAATGGTCTTTTTTCCAAAGGTCCCAAACATCTTCCTAATACTTTAAGAGTATTGGAATGGTGGAGATATCCTTCACAGGATTTGCCATACAATTTTCATCCGAAGAAACTTTCTATATGCAAGTTACCCAAAAGTTGCATTACATCACTGGGGTTGGCTGTCTTATTTTTGAAAAAGAAGTTCCTGAATTTGACATGTTTGAATTTTGACATTTGTCGATATTTAACACATATACCTGATGTATCTGGTCTCTCCCATTTGGAAAAATTGTCATTTCGAGGGTGTGAGAATTTATTTAAAATCCACTGTTCAGTTGGGCTCTTGGAAAAACTTAAAATCTTGGATGCTGTTGGTTGCCACAAGCTCAAGAGTTTTCCACCCATCAAGTTGACCTCTCTTGAACAACTCGAACTTTTGGACTGTGTCAGTCTCGAGAGTTTTCCAGAAATATTAGGAAAGATGGAAAATTTAACAAAACTTTGGTTGGCAGGAACTCCCATAAAAGAATTCCCACTTTCAGTTCAAAATCTTACTCGACTTCAGACATTATATTTGGACGGTTTGCTAGGAAAGTCGACAAGGTTCTGTAATGCTGCCATTTTCATTCGGAGCATTTCTATGATGCCAGAACTGGCTGAGATTCACGCTTTTCAACGGGAAGGGTGGGTATTGCCTAAGGAGGGTGAGGGTGAGGGTGCAGAAAAAGTGAGCTTAACTGTGTCTTCAAACGTTCAACGTCTTTGTCTCCAAAACTGCAACTTGTCAGATGAATTTTTTCCAATATTTCTTCCATATTTTACTTGCTCCAGCAATCAATAA 2112 0.3707 MSRHRHEPFRLTSHKIHLLNREGYEYEFIQKIVELVSSKINRAPLPVADYPVGLESQMLEVKSLMDVGSDDVVHMVGFHGLGGIGKTTLAVAVYNSIADHFEGLCFLENVRETSNKHGLQYLQSNLLYETVGEKDIKLTSVRQGISIIQHRLQQKKVLLILDDVDKQEQLQSIVGRPDWFGPGSRVIITTRDKQLLARHGVKRMYEMKELNEDDALQLLSWKAFKLEKIDPHYEDVLNRAVTYASGLPLALEVIGSNLFGKNVEQWESALTRYERIPDKTIQEILKVSYDALEEDKQSVFLDIACCFKGCKLVEVQDILHANHGNGMKYHIGVLVEKSLIKINWYGRVTLHDLIEDMGKEIVRKESPNELGKRSRLWFAKDIVQVLEENQGTSQVEIIFMDFPLFEEEEIEVEWDGNAFNKMKNLKTLIIRNGLFSKGPKHLPNTLRVLEWWRYPSQDLPYNFHPKKLSICKLPKSCITSLGLAVLFLKKKFLNLTCLNFDICRYLTHIPDVSGLSHLEKLSFRGCENLFKIHCSVGLLEKLKILDAVGCHKLKSFPPIKLTSLEQLELLDCVSLESFPEILGKMENLTKLWLAGTPIKEFPLSVQNLTRLQTLYLDGLLGKSTRFCNAAIFIRSISMMPELAEIHAFQREGWVLPKEGEGEGAEKVSLTVSSNVQRLCLQNCNLSDEFFPIFLPYFTCSSNQ 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02784 703 PRINTS Disease resistance protein signature 537 553 - -
Pumo3g02784 703 PRINTS Disease resistance protein signature 151 165 - -
Pumo3g02784 703 PRINTS Disease resistance protein signature 75 90 - -
Pumo3g02784 703 PRINTS Disease resistance protein signature 244 258 - -
Pumo3g02784 703 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 618 IPR044974 GO:0006952
Pumo3g02784 703 SUPERFAMILY L domain-like 413 694 - -
Pumo3g02784 703 Gene3D - 32 203 IPR027417 -
Pumo3g02784 703 Gene3D Ribonuclease Inhibitor 384 703 IPR032675 -
Pumo3g02784 703 SUPERFAMILY "Winged helix" DNA-binding domain 280 387 IPR036390 -
Pumo3g02784 703 Pfam NB-ARC domain 69 291 IPR002182 GO:0043531
Pumo3g02784 703 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 303 IPR027417 -
Pumo3g02784 703 Gene3D - 209 293 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02784 Pumo-Chr3 47106869 47109342 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02784 52 617 WRKY Transcription Factor Family AT4G12020 31.389 4.49e-70 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02784 - - gmx:100784366 928.317