Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02771 ATGTTTCCAACAATCATCTCTCAGGATATCCCAGATGCACTTAACAGGATGTTAAGCTTGATTATGGTTAACTTGTCAAATAATCAGCTCAGTGGTCCATTGCCACATTATGGATCATTTCAGAAGAATCCTGCTTCAAGTTATTTGGGAAACAAAGGGCTTTGTGGGGAGCCATTGAACGCAACATGTGAAGATCATCATGATGATTATGAACCTACGGAATACCAGTACCATCATGATATTGTTTATGAAACCATAGTAACCATATTTGGAGCATGTTTTGCAGGTTTTATAGCACTAACTGTTTATGTCCATATCATCATAAAGGGGCAAGAACAAGTAGCATATGAGGCTGTGATAGAAGGTGATGGAACCAACAACAAACCATCCATAATATCAGGAAGGGTTTTTGTTGACGATCTAAGACAAGCATTGGACCTTGATGTTGTTGTTAGAGCAACTCTGAATGAATCTAATAAGCCTAGCAAGGGAACATTTAGTACAGTTTACAAGGCATTCATGCCCTCTGGGACAATCTTACTTGTAAGGAAACTTATCTCAATGGACATGACCGTAATGCACTACCAAAGCAAGATAATTATCGAGCTTCGAAGGTTGAGCATACTATGTCATGAAAATGTATTGAAACCCATTAGATATGTTATTTGTAGTGATGTTGCTCTTCTCATTCATCAGTATCTACCCAATGGAACATTGGTTCAACTTCTTCATGAATCTATAATGCAACCTGGATATCGGCCTGACTGGCCTGCCAGACTATCTATTGCAATGGGAGTGGCAAAAGGTTTGGCTTTCCTTCATCACTTGGCAATCATCCACCTTGACATTTCTTCTAGCAATGTTCTACTAGATGCAAATTTTAAGCCATTGATTGGGGACATTGAGATATCAAAATTTCTAGATCCAACCAAAGGCACTGCTAGGATTATTCCATATGTTGGTACCTTCGGTTACGTTCCACCAGAATATGCATATACGATGCGAGTCACAGCACCTGGAAATGTTTATAGCTTTGGTGTGATTCTGTTAGAGATGCTAACAACTCGAACACCGGTGGATGAGGCTTTTGGTGAAGGTGTGGATTTGGTGAAGTGGGTTCATGGAGCTGCAGCAAGAGGTGAAACTCCAGAGCAGATACTGGATGCAAGGCTTAGCTCAGTTTCATTTCATTGGAGGAAACAAATGCTTGCTACTCTAAAACTGGCCTTGCTATGCACTGACCATAGGCCAGCAAAACGACCAAAGATGATGAACGTGGTGGGAATGCTTCGAGAAATAAGGAATGAGTGA 1311 0.4058 MFPTIISQDIPDALNRMLSLIMVNLSNNQLSGPLPHYGSFQKNPASSYLGNKGLCGEPLNATCEDHHDDYEPTEYQYHHDIVYETIVTIFGACFAGFIALTVYVHIIIKGQEQVAYEAVIEGDGTNNKPSIISGRVFVDDLRQALDLDVVVRATLNESNKPSKGTFSTVYKAFMPSGTILLVRKLISMDMTVMHYQSKIIIELRRLSILCHENVLKPIRYVICSDVALLIHQYLPNGTLVQLLHESIMQPGYRPDWPARLSIAMGVAKGLAFLHHLAIIHLDISSSNVLLDANFKPLIGDIEISKFLDPTKGTARIIPYVGTFGYVPPEYAYTMRVTAPGNVYSFGVILLEMLTTRTPVDEAFGEGVDLVKWVHGAAARGETPEQILDARLSSVSFHWRKQMLATLKLALLCTDHRPAKRPKMMNVVGMLREIRNE 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02771 436 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 125 233 - -
Pumo3g02771 436 SUPERFAMILY Protein kinase-like (PK-like) 157 430 IPR011009 -
Pumo3g02771 436 Gene3D Ribonuclease Inhibitor 4 71 IPR032675 -
Pumo3g02771 436 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 7 435 - -
Pumo3g02771 436 ProSitePatterns Tyrosine protein kinases specific active-site signature. 278 290 IPR008266 GO:0004672|GO:0006468
Pumo3g02771 436 Pfam Protein kinase domain 163 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g02771 436 ProSiteProfiles Protein kinase domain profile. 155 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g02771 436 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 234 436 - -
Pumo3g02771 436 Gene3D Transferase(Phosphotransferase) domain 1 234 436 - -
Pumo3g02771 436 Gene3D Phosphorylase Kinase; domain 1 125 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02771 Pumo-Chr3 46527539 46529800 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02771 4 434 Receptor kinase-like Gene Family AT2G41820 57.604 2.47e-178 519
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pumo3g02771 Pkinase 3.7e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02771 - - gmx:100805933 567.385