Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02763 ATGGCTTCGTCTTCCTCCGATCCTGGCAAGTCCGAAGCTGGTGGCGGCGGTTCGGAGACTCCCGAAGCAACCGCGGCTAACGAGGAACAGTTACGGCTAATGAAGAAGCCGAAGAAAGAGAGAGTGTGCACTGCGAAGGAGCGAATCAGCAAAATGCCTCCTTGTGCTGCGGGCAAACGCAGCTCCATCTACCGCGGCGTCACCAGGCATAGATGGACTGGTCGTTATGAAGCACATCTTTGGGACAAAAGTACATGGAACCAGAATCAGAATAAGAAAGGAAAGCAAGTTTACTTGGGGGCATATGATGATGAAGAGGCAGCAGCTAGAGCATATGACCTTGCTGCTCTGAAATATTGGGGTCCAAGTGCTCTCATAAACTTTCCAGTGACTGATTATGCAAGAGATCTAGAAGAAATGCAGAATGTATCGAGAGAGGAATACCTAGCATCTTTACGCCGGAAGAGCAGTGGTTTTTTCAAGAGGACTATCCAAATACCGAGGACTCTCCAGGTGGAAGAAATCAATTAG 531 0.4878 MASSSSDPGKSEAGGGGSETPEATAANEEQLRLMKKPKKERVCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPSALINFPVTDYARDLEEMQNVSREEYLASLRRKSSGFFKRTIQIPRTLQVEEIN 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02763 176 PRINTS Ethylene responsive element binding protein signature 64 75 IPR001471 GO:0003700|GO:0006355
Pumo3g02763 176 PRINTS Ethylene responsive element binding protein signature 111 131 IPR001471 GO:0003700|GO:0006355
Pumo3g02763 176 FunFam AP2-like ethylene-responsive transcription factor 62 131 - -
Pumo3g02763 176 ProSiteProfiles AP2/ERF domain profile. 63 129 IPR001471 GO:0003700|GO:0006355
Pumo3g02763 176 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 21 159 - -
Pumo3g02763 176 MobiDBLite consensus disorder prediction 1 39 - -
Pumo3g02763 176 Gene3D AP2/ERF domain 63 131 IPR036955 GO:0003700|GO:0006355
Pumo3g02763 176 SUPERFAMILY DNA-binding domain 62 130 IPR016177 GO:0003677
Pumo3g02763 176 Pfam AP2 domain 63 121 IPR001471 GO:0003700|GO:0006355
Pumo3g02763 176 SMART rav1_2 63 135 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02763 Pumo-Chr3 46155240 46158056 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02763 24 171 AP2-EREBP Transcription Factor Family AT2G41710 84.106 5.42e-77 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pumo3g02763 AP2 2.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02763 K09285 - gmx:100795084 276.174