Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02758 ATGTCGAGTTTTCTGAATCCTGAGGAGTTCGAACTGAGTAACAAGGATCGTTCCATCGAAGCATTGGGTAAATGGAGATCAGCAGCGTGGTTGGTCAAGAACCCTCGCAGACGCTTCCGCTGGGCGGCGGATCTCGTCAAACGCAAACACGCCGAGGAAAAACGCCTCAAATTACAGAGCACACTTCGGAGCACGATTAGGACCGCTTTTAATGTTCACAAGGCAGCAGATCAATTTATCAGCGTTCTTCCTCCAGCTGAATACAAGGTGTCAGGAAAGACGAGAGAAGCTGGTTTTGGTATTGAACCAGATGATATTGCATCACTTGTTCGAGGCCATGATTACAAGAACTATAAAAAAATTGGTCAAGTTGAAGGGGTTATAGAGAAGCTCGGTGCCTCAGTCGATGATGGTGTTAGTCAAGACAGTATAGATACCAGGCAAGAGATTTATGGAGTCAACCGTTATACTGAGAAACCTTCTAAAAGCTTCCTGATGTTTGTCTGGGAAGCACTGCATGACTTAACACTAATCATTCTCATAGTTTGTGCTATAGTTTCTATAGCTATAGGGCTTCCCACTGAAGGGTGGCCAAAAGGTGTTTATGATGGTCTGGGAATCATACTTAGTATATTCTTGGTGGTCATTGTTACTGCTATCAGTGACTACAAGCAATCCCTGCAGTTCAGGGATTTGGACAAAGAAAAGAAAAAGATCTTTGTTCAGGTCACAAGGGACAGAAAAAGACAGAAGGTCTCAATTTATGATTTGGTTGTTGGAGATATTGTTCATTTGTCAACTGGTGATCAAGTTCCAGCTGATGGAGTTTATATATCAGGATATTCTTTGGTAATTGATGAGTCAAGTTTGACGGGTGAGAGCGAACCGGTAAATATAGATGAAAAAAGACCTTTTCTTCTTTCAGGAACCAAAGTGCAAGATGGTCAGGGGAAGATGATAGTTACAACTGTTGGCATGAGGACTGAATGGGGAAAGTTGATGGAAACTTTAAGTGAGGGAGGAGAGGATGAGACTCCACTGCAGGTGAAATTGAATGGAGTTGCTACAGTTATTGGAAAAATTGGATTGACTTTTTCTGTGCTGACATTTGTGGTGTTGACAATAAGGTTTGTGATTGAAAAAGCAGTCCGTGGTGAGTTTGCTAGTTGGTCTTCAAATGATGCATTGAAGCTGTTGGACTACTTTGCTATTGCGGTAACCATAATAGTTGTTGCAATTCCTGAAGGATTGCCATTAGCTGTGACACTCAGTCTTGCTTTTGCAATGAAAAAGTTAATGAAGGATAAGGCACTTGTGAGACATCTTTCTGCCTGTGAGACTATGGGTTCAGCGACTTGCATCTGCACAGATAAAACAGGAACATTGACCACTAACCATATGGTGGTTAATAAAATTTGGATATGTGGAAAGAGCAAGGAGATTAAAGGTAATGAGAGTGTTGACAAACTGAAGACAGAGATATCTGAAGAAGTTTTAAGCATCCTTTTGCGGTCTATATTTCAAAATACTTCTTCCGAAGTAGTTAAGGACAAAGATGGAAAAACGTCAATATTGGGAACACCAACAGAATCGGCATTATTGGAATTTGGCTTGCTTTCAGGTGGTGATTTTGAAGCGCAGCGTGCAACATATAAGATACTTAAGATTGAGCCTTTCAATTCAGTCCGGAAGAAGATGTCTGTGCTAGTAGGTCTTCCTGATGGAGACGTCCAAGCTTTCTGCAAAGGTGCATCAGAAATAGTATTAAAATTGTGTAACAAAATTATTGATCCTAATGGAACAGCTGTTGATCTTTCTGATGAGCAGGCAAAGAAAGTCTCTGATGTTATAAATGGCTTTGCCTCTGAAGCTTTGAGAACTCTTTGTTTAGCTGTCAAAGATGTAAATGAAGGGGAAACCAGCATCCCTGAAGATAGCTATACTCTGATAGCCATTGTGGGAATCAAGGATCCTGTGCGCCCTGGGGTTAGGGAAGCTGTTAAAACTTGTTTAGCTGCTGGAATTACTGTCCGCATGGTAACTGGTGATAACATAAATACAGCTAGGGCTATAGCTAAAGAATGTGGCATTCTTACAGAGGATGGTGTTGCCATAGAAGGATCCCACTTTCGTGACTTGTCTCAAGAACAAATGAAGAGTATTATACCAAGAATTCAGGTTATGGCACGATCCTTACCTCTTGACAAGCATACCTTAGTAACCCGTTTGAGGAATATGTTTGGTGAGGTTGTAGCTGTTACTGGTGATGGAACAAATGATGCTCCTGCACTGCATGAGTCAGACATTGGGCTTGCTATGGGCATAGCTGGAACTGAGGTTGCCAAAGAAAATGCTGATGTGATTATAATGGATGATAACTTCAATACTATTGTCAATGTGGCCAGATGGGGACGGGCTATCTACATAAACATTCAAAAATTTGTGCAGTTTCAGTTAACAGTCAATATTGTTGCTCTGATTATTAACTTTGTTTCTGCCTGCATCACAGGATCTGCTCCCCTCACAGCTGTTCAGTTGCTTTGGGTCAACTTGATTATGGACACTCTGGGTGCATTGGCTTTGGCCACTGAACCTCCCAATGATGGACTTATGCTAAGACCCCCAGTTGGAAGGACAACAAATTTTATCACCAAACCCATGTGGAGGAATATTTTTGGTCAAAGTTTATATCAACTAATTGTCCTTGCGGTTCTCACTTTTGATGGGAAGAGGCTACTGAGAATTAATGGTTCAGATGCAACTATGGTGCTCAACACTTTGATTTTCAACTCCTTTGTATTTTGCCAGGTTTTCAATGAGATAAACAGCCGAGAAATCGAAAAGATAAACATATTCAAAGGCATGTTTGCGAGCTGGATATTTTTTACAGTGATTTTCTCCACAGTGGTGTTCCAAGTACTCATAGTTGAGTTCCTGGGAACATTTGCCAGCACAGTGCCTCTAAGCTGGCAATTCTGGGTACTCAGCGTGGTAATTGGAGCATTTAGCATGCCTATATCTGCTATACTCAAGTGCATCCCAGTTGAAAGAGGAGATGCTTCAAAGCACCATGATGGTTATGAGGCACTGCCTTCTGGTCCCGAACTGGCATAA 3114 0.4159 MSSFLNPEEFELSNKDRSIEALGKWRSAAWLVKNPRRRFRWAADLVKRKHAEEKRLKLQSTLRSTIRTAFNVHKAADQFISVLPPAEYKVSGKTREAGFGIEPDDIASLVRGHDYKNYKKIGQVEGVIEKLGASVDDGVSQDSIDTRQEIYGVNRYTEKPSKSFLMFVWEALHDLTLIILIVCAIVSIAIGLPTEGWPKGVYDGLGIILSIFLVVIVTAISDYKQSLQFRDLDKEKKKIFVQVTRDRKRQKVSIYDLVVGDIVHLSTGDQVPADGVYISGYSLVIDESSLTGESEPVNIDEKRPFLLSGTKVQDGQGKMIVTTVGMRTEWGKLMETLSEGGEDETPLQVKLNGVATVIGKIGLTFSVLTFVVLTIRFVIEKAVRGEFASWSSNDALKLLDYFAIAVTIIVVAIPEGLPLAVTLSLAFAMKKLMKDKALVRHLSACETMGSATCICTDKTGTLTTNHMVVNKIWICGKSKEIKGNESVDKLKTEISEEVLSILLRSIFQNTSSEVVKDKDGKTSILGTPTESALLEFGLLSGGDFEAQRATYKILKIEPFNSVRKKMSVLVGLPDGDVQAFCKGASEIVLKLCNKIIDPNGTAVDLSDEQAKKVSDVINGFASEALRTLCLAVKDVNEGETSIPEDSYTLIAIVGIKDPVRPGVREAVKTCLAAGITVRMVTGDNINTARAIAKECGILTEDGVAIEGSHFRDLSQEQMKSIIPRIQVMARSLPLDKHTLVTRLRNMFGEVVAVTGDGTNDAPALHESDIGLAMGIAGTEVAKENADVIIMDDNFNTIVNVARWGRAIYINIQKFVQFQLTVNIVALIINFVSACITGSAPLTAVQLLWVNLIMDTLGALALATEPPNDGLMLRPPVGRTTNFITKPMWRNIFGQSLYQLIVLAVLTFDGKRLLRINGSDATMVLNTLIFNSFVFCQVFNEINSREIEKINIFKGMFASWIFFTVIFSTVVFQVLIVEFLGTFASTVPLSWQFWVLSVVIGAFSMPISAILKCIPVERGDASKHHDGYEALPSGPELA 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02758 1037 SFLD Haloacid Dehalogenase 437 807 - -
Pumo3g02758 1037 ProSitePatterns E1-E2 ATPases phosphorylation site. 457 463 IPR018303 -
Pumo3g02758 1037 Gene3D - 465 658 IPR023299 GO:0000166
Pumo3g02758 1037 Gene3D - 138 338 - -
Pumo3g02758 1037 SUPERFAMILY HAD-like 454 859 IPR036412 -
Pumo3g02758 1037 Gene3D - 17 81 - -
Pumo3g02758 1037 FunFam Calcium-transporting ATPase 650 799 - -
Pumo3g02758 1037 SUPERFAMILY Calcium ATPase, transmembrane domain M 122 1015 IPR023298 -
Pumo3g02758 1037 Gene3D - 170 1013 - -
Pumo3g02758 1037 Gene3D - 452 799 IPR023214 -
Pumo3g02758 1037 FunFam Calcium-transporting ATPase 771 1017 - -
Pumo3g02758 1037 SFLD p-type atpase 437 807 IPR044492 -
Pumo3g02758 1037 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 461 663 IPR023299 GO:0000166
Pumo3g02758 1037 FunFam Calcium-transporting ATPase 465 658 - -
Pumo3g02758 1037 Pfam Cation transporter/ATPase, N-terminus 123 187 IPR004014 -
Pumo3g02758 1037 SUPERFAMILY Calcium ATPase, transduction domain A 240 336 IPR008250 -
Pumo3g02758 1037 Pfam Cation transport ATPase (P-type) 511 595 - -
Pumo3g02758 1037 SMART Cation_ATPase_N_a_2 120 192 IPR004014 -
Pumo3g02758 1037 PRINTS H+-transporting ATPase (proton pump) signature 754 770 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo3g02758 1037 PRINTS H+-transporting ATPase (proton pump) signature 613 631 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo3g02758 1037 PRINTS H+-transporting ATPase (proton pump) signature 786 811 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo3g02758 1037 CDD P-type_ATPase_Ca_PMCA-like 144 887 - -
Pumo3g02758 1037 FunFam Calcium-transporting ATPase 217 338 - -
Pumo3g02758 1037 Pfam Cation transporting ATPase, C-terminus 839 1012 IPR006068 -
Pumo3g02758 1037 Pfam E1-E2 ATPase 240 434 - -
Pumo3g02758 1037 PANTHER CATION TRANSPORTING ATPASE 89 1015 - -
Pumo3g02758 1037 Pfam Ca2+-ATPase N terminal autoinhibitory domain 8 49 IPR024750 GO:0005516
Pumo3g02758 1037 NCBIfam calcium-translocating P-type ATPase, PMCA-type 115 1016 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pumo3g02758 1037 PRINTS P-type cation-transporting ATPase superfamily signature 754 773 - -
Pumo3g02758 1037 PRINTS P-type cation-transporting ATPase superfamily signature 455 469 - -
Pumo3g02758 1037 PRINTS P-type cation-transporting ATPase superfamily signature 673 683 - -
Pumo3g02758 1037 PRINTS P-type cation-transporting ATPase superfamily signature 778 790 - -
Pumo3g02758 1037 PRINTS P-type cation-transporting ATPase superfamily signature 286 300 - -
Pumo3g02758 1037 PRINTS P-type cation-transporting ATPase superfamily signature 651 662 - -
Pumo3g02758 1037 FunFam Calcium-transporting ATPase 17 81 - -
Pumo3g02758 1037 NCBIfam HAD-IC family P-type ATPase 717 842 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo3g02758 1037 NCBIfam HAD-IC family P-type ATPase 207 495 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02758 Pumo-Chr3 46006981 46017168 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02758 66 1034 Primary Pumps ATPases AT3G57330 72.268 0.0 1457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02758 K01537 - gmx:100785768 1899.4