Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02708 ATGGAATTGTTTCATAAACCGATGACTTTCCTTCTAATCTTGTTTGTTACTTGTTTCTTTTGTCTTGGTAATGCCATAGATTGCTGTGGGAAGAATGTTACTTATACCATCACTGTTGGTCGATATGGCAAAGTAGCATTTAGAACAATTCAAGCAGCCATTGATTCTGTAAAGAGTAACAATGATCGATGGGTCAAGATTCACATAAACGCCGGCTTATACATAGAAAGGATGTCTATTCCCCTAGAAAAGCCATGCATCATTTCAGAAGGAGAGGGTAGCCCGAACACAAGGGAATTCCTTTGCCACAAGAATTGTGTGATCAACGCTGTAGGGAGATATAAATCTTTACCAGGTTTTGTCACAGCTCAAGGGCGAAATTCATCAGATGACCCAGGTGGTTTTGCATTTAAAGGGGGTTCCCTTACAGGGAATTTTATGGTGAATTTAAGAAGAGCATGGCGTGCTTACTCTAGAGTTATATTTCATGGAACATATTTTTCTTCCATTGTAACTCCTCAAGGATGGAATGCTTGGAATTACGTTGGTCAAGAGTAA 558 0.3943 MELFHKPMTFLLILFVTCFFCLGNAIDCCGKNVTYTITVGRYGKVAFRTIQAAIDSVKSNNDRWVKIHINAGLYIERMSIPLEKPCIISEGEGSPNTREFLCHKNCVINAVGRYKSLPGFVTAQGRNSSDDPGGFAFKGGSLTGNFMVNLRRAWRAYSRVIFHGTYFSSIVTPQGWNAWNYVGQE 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02708 185 Gene3D - 101 185 IPR012334 -
Pumo3g02708 185 Gene3D - 24 100 IPR012334 -
Pumo3g02708 185 Pfam Pectinesterase 37 97 IPR000070 GO:0030599|GO:0042545
Pumo3g02708 185 Pfam Pectinesterase 104 180 IPR000070 GO:0030599|GO:0042545
Pumo3g02708 185 SUPERFAMILY Pectin lyase-like 34 180 IPR011050 -
Pumo3g02708 185 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 104 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02708 Pumo-Chr3 43995125 44001401 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02708 27 97 Carbohydrate Esterase AT2G19150 35.211 1.31e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02708 - - var:108336510 127.872