Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pumo3g02688 | ATGGAAGTAGACAAGGAAAGTACCACATCAACTATTACTGCAGAACCCTCTGTACCTGCCTCTGACGGTCAAGATCCTGTTTCTTCTGTTAATGCATCTCTACCCCATCCAATACAACCTGTTATTCCACCGGTTATTGCACCTTCTGCTGTACCTCCTTTAGCTCCAATTCCTGCAATTCCTCCCCCTCGCCCGCTGGCACCGCTTCCAGTTCGGCCACCAGTCATTAGGCCACCTGTGCGACAAAATGGCGAGGTTGGATCAAGTGACTCTGATTCGGACAATGATGACTCAAATGCAAGAATTAACCAGGGGGCCGGAGAGTATGAGATATCTGAAGAGAGTAGGCTGGTGAGAGAGCGGCAGGAAAAGGCAATGCAGGAACTCATGATGAAGAGGCGTGCTGCTGCTCTTGCTGTTCCTACGAATGATATGGCCGTGCGAGCTCGGCTTCGACATCTTGGCGAACCGATAACTCTGTTTGGTGAGAGGGAGATGGAGAGACGGGACAGGTTGCGGATGATTATGGCAAAGTTGGATGCAGACGGTCAGCTGGAGAAGCTGATGAAAGCTCATGAGGAAGAAGAGGCTGCGGCTTCTGCTCCGAAAGATGAGGCTGAGGAAGAACTGCTGTATCCTTTTTACACTGAAGGGTCAAAGGCTCTCCTGGATGCAAGAATATATATTGCTAAATATTCTTTGTCAAGGGCAGCATTACGGATTCAACGTGCACAGAGAAGAAGGGATGATCCAGATGAAGATATGGATGCAGAGATGGATTGGGCATTGAAGCAGGCTGGGAGTTTGAGTCTTGAATTCAGTGAAATTGGAGATGATCGCCCGCTTTCTGGTTGCTCCTTCTCAAGGGATGGAAAATGGCTTGCTACCTGTTCTCTGACTGGAGCTTCCAAGTTGTGGAGCATGCCCAAAATAAAAAAGCATTCCACCTTTAAAGGGCACACAGAACGTGCTACTGATGTTACTTATTCTCCTATTCATGATCATCTAGCAACTGCCTCTGCTGATCGAACAGCAAAGTATTGGAATGATCAAGGATCACTTTTGAAGACATTCGAGGGTCATCTAGACCGTCTTGCACGCATTGCCTTCCATCCATCAGGGAAGTACCTGGGCACTGCTAGCTTTGATAAGACATGGAGATTATGGGACATAGAAACAGGAGACGAGTTGCTTCTTCAAGAAGGCCATAGTAGAAGTGTATATGGTTTGGCTTTCCACCATGATGGATCATTAGCTGCATCTTGTGGACTAGACTCTCTGGCTCGTGTTTGGGACCTCCGAACTGGAAAAAGTATTCTTGCACTGGAAGGTCATGTCAAGCCGGTTCTTGGCATCAGTTTTTCACCTAACGGATATCATCTAGCCACGGGTGGTGAAGACAACACTTGTCGGATTTGGGATTTGAGGAAGAAGAAATCCTTTTATACTATTCCTGCTCACTCTAATTTAATATCACAAGTTAAATTTGAGCCACAAGAAGGTTACTTTTTGGTAACTGCCTCATATGACATGACGGCTAAGGTATGGTCAGGCCGTGACTTTAAGCCTGTGAAGACACTATCTGGGCATGAAGCAAAAGTTACTTCTGTGGATGTTCTCGGAGATGGCAGGTATATTGCAACTGTCTCCCATGATCGCACCATAAAGCTGTGGTCCAGTAGTACGATTGATGAACAAGCTATGGATGTTGACTAA | 1716 | 0.4662 | MEVDKESTTSTITAEPSVPASDGQDPVSSVNASLPHPIQPVIPPVIAPSAVPPLAPIPAIPPPRPLAPLPVRPPVIRPPVRQNGEVGSSDSDSDNDDSNARINQGAGEYEISEESRLVRERQEKAMQELMMKRRAAALAVPTNDMAVRARLRHLGEPITLFGEREMERRDRLRMIMAKLDADGQLEKLMKAHEEEEAAASAPKDEAEEELLYPFYTEGSKALLDARIYIAKYSLSRAALRIQRAQRRRDDPDEDMDAEMDWALKQAGSLSLEFSEIGDDRPLSGCSFSRDGKWLATCSLTGASKLWSMPKIKKHSTFKGHTERATDVTYSPIHDHLATASADRTAKYWNDQGSLLKTFEGHLDRLARIAFHPSGKYLGTASFDKTWRLWDIETGDELLLQEGHSRSVYGLAFHHDGSLAASCGLDSLARVWDLRTGKSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKKKSFYTIPAHSNLISQVKFEPQEGYFLVTASYDMTAKVWSGRDFKPVKTLSGHEAKVTSVDVLGDGRYIATVSHDRTIKLWSSSTIDEQAMDVD | 571 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pumo3g02688 | 571 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 419 | 433 | IPR019775 | - | |
| Pumo3g02688 | 571 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 400 | 441 | IPR001680 | GO:0005515 | |
| Pumo3g02688 | 571 | Pfam | WD domain, G-beta repeat | 352 | 390 | IPR001680 | GO:0005515 | |
| Pumo3g02688 | 571 | Pfam | WD domain, G-beta repeat | 315 | 349 | IPR001680 | GO:0005515 | |
| Pumo3g02688 | 571 | Pfam | WD domain, G-beta repeat | 522 | 559 | IPR001680 | GO:0005515 | |
| Pumo3g02688 | 571 | Pfam | WD domain, G-beta repeat | 439 | 474 | IPR001680 | GO:0005515 | |
| Pumo3g02688 | 571 | Pfam | WD domain, G-beta repeat | 401 | 432 | IPR001680 | GO:0005515 | |
| Pumo3g02688 | 571 | Gene3D | - | 117 | 202 | IPR036285 | - | |
| Pumo3g02688 | 571 | SMART | pr04_2 | 142 | 195 | IPR014906 | - | |
| Pumo3g02688 | 571 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 442 | 483 | IPR001680 | GO:0005515 |
Showing 1 to 10 of 45 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pumo3g02688 | K12662 | - | gmx:100788948 | 936.791 |
Showing 1 to 1 of 1 entries