Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02684 ATGGTGACTGAAACTGACTCAAGAGATAGCTCTCTCATTCTTCTCAAACAAGGAGCTGAAGCTAGGGTTTTTGACTCTTCTTTTGTGGGAAGGAGATGTGTTGTCAAGGAACGCTTCTCAAAGAAGTACAGGCATCCAACTTTGGATTCTAAATTGACACTCAAGCGCTTAAACGCGGAGGCGAGGTGCATGACCAAAGCAAGGAGACTTGGGGTTTGTACTCCCGTGCTGTATGCTGCGGATCCTGTGTTGCACACTTTGACATTTGAGTATGTTGAGGGCCCTTCAGTCAAAGATGTATTTCTTGAGTTTGGGTCACACGGCGTTGACAAAGAGTGTATGGACAACATTGCATCCCAAATTGGTGATGCAATTGGAAAGCTACATGATGGTGGTCTTGTTCATGGTGATTTAACAACATCAAACATGTTACTCAAGAATGGTACCAATCAGTTGGTTCTTATTGATTTTGGTTTGAGCTTCACTTCAACTCTACCAGAACATAAAGCTGTTGATTTGTATGTTCTTGAAAGAGCTATTCTGTCAATGCATTCTTCATGTAGGAATGTGATGGATCAGATACTTGCTGCATACCGCAAGTCATCAAAGCAGTGGTCATCCACATTGAACAAGCTGGCACAAGGTTATACCCTGCTTCATATACTTGTTTACTTTAGCACATTTTCTTGA 690 0.4203 MVTETDSRDSSLILLKQGAEARVFDSSFVGRRCVVKERFSKKYRHPTLDSKLTLKRLNAEARCMTKARRLGVCTPVLYAADPVLHTLTFEYVEGPSVKDVFLEFGSHGVDKECMDNIASQIGDAIGKLHDGGLVHGDLTTSNMLLKNGTNQLVLIDFGLSFTSTLPEHKAVDLYVLERAILSMHSSCRNVMDQILAAYRKSSKQWSSTLNKLAQGYTLLHILVYFSTFS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02684 229 ProSitePatterns Tyrosine protein kinases specific active-site signature. 133 145 IPR008266 GO:0004672|GO:0006468
Pumo3g02684 229 Pfam Protein kinase domain 44 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g02684 229 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 4 214 IPR022495 GO:0004674
Pumo3g02684 229 NCBIfam KEOPS complex kinase/ATPase Bud32 18 212 IPR022495 GO:0004674
Pumo3g02684 229 Gene3D Transferase(Phosphotransferase) domain 1 108 217 - -
Pumo3g02684 229 ProSiteProfiles Protein kinase domain profile. 9 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g02684 229 SMART serkin_6 9 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g02684 229 SUPERFAMILY Protein kinase-like (PK-like) 14 173 IPR011009 -
Pumo3g02684 229 FunFam TP53-regulating kinase isoform X1 20 92 - -
Pumo3g02684 229 Gene3D Phosphorylase Kinase; domain 1 20 92 - -
Pumo3g02684 229 FunFam Protein kinase superfamily protein 107 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02684 Pumo-Chr3 42860772 42862694 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02684 6 164 MAP Kinase Kinase Kinase AT5G66710 26.994 4.83e-06 45.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pumo3g02684 Pkinase 3e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02684 K08851 - gmx:100782376 377.481