Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02666 ATGTTATCTCAGATATGGATCTTTATGGTCATAATAATGTGTGCAAGCTTTCAGCTCAATTGCTCAACAGTGGAATCATCATCTCCAGAGGAAGATAAGATCCAAAATTTGCCAGACCAACCAGAGGTTAGTTTTCAACAGTTTGGAGGCTACATTACTGTCCATGACAAACAACATAGAGCTTTGTATTACTACTTTGTTGAGGCTGAAACAAACCCTGCTTCCAAGCCTCTCATTCTCTGGCTAAATGGAGGACCTGGTTGTTCCTCTATTGGAGTTGGAGCATTCACTGAACATGGTCCTTTTGTCACTAACTATGGAGAGTCCATTACAAAGAATAAGTACAGTTGGAATAGAGAGGCCAATATTCTGTACTTGGAATCCCCAGCTGGCGTTGGATTTTCTTATTCTACTGATAAATCATTTTACAACACTCTCAATGATGACATCACAGCCCGAGACAACTTGGTGTTTCTGCAGAGGTGGCTGGCTAAGTTTCCACAGTACAAGAACAATGAATTTTACATAATGGGGGAGAGCTATGGAGGACACTATGTGCCACAACTTGCTGAACTCATTGTAAAGAGTAAGATGAACTCCAATCTAAAGGGGATAGGGATAGGGAATCCCCTTTTGGAGTTTGGAACTGATTACAATTCAGTTGATGAGTTCTACTGGTCACACGGCATGATATCAGATTATGTTTATGAGCTTCGGTCTTCTGTTTGTAACAATTCGAAATCTTCGAAACAAAGCTTAAGGGGTTGTTTCTCTCCGGATTGTATTTCTGTGCTTCTTCAGATCTCTGATGAATACTCTGATTTGGATTCCATAGATCCCTATTATGTGATTGGTGATAAATGTCTTTCCTACAATTTATCACAAGCTGCAATTCTCACTCACCGCCATAGGTCAAGCATATATCAAATGTTAAGGTCTCTACATATGCAAAAAGATAAAAATACTTACCAATACCACCAGGAGCTTGATAAATGCCCAGAGAAAAATGCAGAGATGTACTTAAACAGAAAAGAGGTGCAGAAGGCTTTGCATGCTCGGCTTGTTGGAGTGAATCAATATCGTTTGTGTAGCCAGGTAGTGTTTGATAAATATAAGAGAGAAGATGAAGAAATACCAACAATCAACATTTTGGGCTCGCTCATAAAATCTGGCCTTCAAGTATTTGTATACAGTGGGGATCAAGACTCTGTCATTCCATTTATTGGCACTCGAAGATTAGTAGATCAACTAGCTAAGAAATTAGGGCTGAAAACAACAGTGCCATACAGTGCTTGGTTTGTTGGAAAACAGGTTGGTGGATGGACACAAGTTTATGGCAATCAACTTACCTATGCTACTATTAGAGGGGCATCACACAGCACTCCAACCACTCAACCAAAGAGATCGTTTGTGTTGTTAGATTCATTTTTACTTGGGAAACGACTCCCTAAAGCATGA 1458 0.3985 MLSQIWIFMVIIMCASFQLNCSTVESSSPEEDKIQNLPDQPEVSFQQFGGYITVHDKQHRALYYYFVEAETNPASKPLILWLNGGPGCSSIGVGAFTEHGPFVTNYGESITKNKYSWNREANILYLESPAGVGFSYSTDKSFYNTLNDDITARDNLVFLQRWLAKFPQYKNNEFYIMGESYGGHYVPQLAELIVKSKMNSNLKGIGIGNPLLEFGTDYNSVDEFYWSHGMISDYVYELRSSVCNNSKSSKQSLRGCFSPDCISVLLQISDEYSDLDSIDPYYVIGDKCLSYNLSQAAILTHRHRSSIYQMLRSLHMQKDKNTYQYHQELDKCPEKNAEMYLNRKEVQKALHARLVGVNQYRLCSQVVFDKYKREDEEIPTINILGSLIKSGLQVFVYSGDQDSVIPFIGTRRLVDQLAKKLGLKTTVPYSAWFVGKQVGGWTQVYGNQLTYATIRGASHSTPTTQPKRSFVLLDSFLLGKRLPKA 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02666 485 SUPERFAMILY alpha/beta-Hydrolases 26 482 IPR029058 -
Pumo3g02666 485 Gene3D alpha/beta hydrolase 23 483 IPR029058 -
Pumo3g02666 485 FunFam Carboxypeptidase 380 479 - -
Pumo3g02666 485 Pfam Serine carboxypeptidase 41 477 IPR001563 GO:0004185|GO:0006508
Pumo3g02666 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Pumo3g02666 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 449 462 IPR001563 GO:0004185|GO:0006508
Pumo3g02666 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Pumo3g02666 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Pumo3g02666 485 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 466 IPR001563 GO:0004185|GO:0006508
Pumo3g02666 485 ProSitePatterns Serine carboxypeptidases, serine active site. 176 183 IPR018202 GO:0004185
Pumo3g02666 485 FunFam Carboxypeptidase 27 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02666 Pumo-Chr3 41617526 41624857 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02666 337 482 Calmodulin-binding Proteins AT2G22960 27.891 1.23e-14 70.5