Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02665 ATGCTATCTCAATCATGTGTTGTGATTGCAACATTACTATTATTTGTAATAGAACAAAGTGTTGTGGGAATGAATTCACTTTCACAAGCTGATAAGATAAGCACTTTGCCAGGGCAGCCACCAGTCAAATTCCAGCAATATGCTGGTTACATTACAGTGGATGAGAAGCAGAAGAGAGCTTTGTTTTACTACTTTGTTGAAGCTGAAGTGGAACCAGCATCAAAGCCACTAGTTCTATGGTTAAATGGAGGGCCTGGTTGTTCTTCTGTTGGAGCTGGAGCTTTTGTTGAGCATGGCCCTTTCAAACCAAGTAACAATGGTCTTTTGAAAAATGAATATAGTTGGAACAAAGAGGCAAATATGCTGTACTTGGAATCACCGGCTGGTGTTGGTTTCTCCTACTCTGCCAATAAATCTTTCTATGACTTTGTGAATGATGAAATAACAGCAAGGGACAATCTTGTTTTCCTACAGCTTTGGTTCACTAAATTCCCAGAGTTCAAAAACAATGATTTCTTTATCACAGGGGAGAGCTATGCAGGTCACTATGTACCCCAACTTGCACAACTCATTGTTCAAACCAAGACCAAGTTCAATCTCAAGGGGATAGCAATAGGGAATCCTCTTCTGGAATTTAACACGGATTTCAACTCCAGAGCTGAGTTTTTCTGGTCCCATGGACTAATATCAGATTCAACTTACGAAATCTTCACTAAAGTATGCAATTATTCCCAAATTAGGAGACAACGTCAAAGTGGGACACTTACCCCCATTTGTTCAGGAGTGAATAGGCTAGTGTCAACGGAAGTTAGCAGATACATTGATACATATGATGTTACACTTGATGTGTGTCTTTCATCAGCAGATCAACAGGCTTATGTGCTGAATCAACTGACTCAACTGCAAGAGGGTGCGAAGATAGATGTTTGTGTGGAAGATGAAACTATCGCATATTTGAATAGGAAAGACGTGCAGGAGGCTCTCCATGCTAAGCTCGTAGGGATCACCTCATGGTCAACTTGCAGTGATATTCTTAACTATGACTTGCAGAATCTAGAGATTCCAACCATTTCTATTCTAGGTGCACTTGCAAAGTCAGGTATCAGGATTCTGGTATACAGTGGAGATCAAGATTCAGTCATCCCTTTAATTGGGACAAGATCCCTGGTAAATGGATTAGCCAAGGACTTTGGACTGAACACAACAGTGTCCTATAGAGCCTGGTTTAAGGGAAGACAGGTGGCTGGTTGGACACAAGTATATGGAGACATCTTATCATTTGCCACCATAAGAGGAGCTGCTCATGAAGCCCCATTTTCCCAACCAGAGAGGTCACTGGTGCTGCTAAAAGCATTTTTGGAAGGAAAGCCACTTCCAGAGCCATTCTTTTAA 1392 0.4138 MLSQSCVVIATLLLFVIEQSVVGMNSLSQADKISTLPGQPPVKFQQYAGYITVDEKQKRALFYYFVEAEVEPASKPLVLWLNGGPGCSSVGAGAFVEHGPFKPSNNGLLKNEYSWNKEANMLYLESPAGVGFSYSANKSFYDFVNDEITARDNLVFLQLWFTKFPEFKNNDFFITGESYAGHYVPQLAQLIVQTKTKFNLKGIAIGNPLLEFNTDFNSRAEFFWSHGLISDSTYEIFTKVCNYSQIRRQRQSGTLTPICSGVNRLVSTEVSRYIDTYDVTLDVCLSSADQQAYVLNQLTQLQEGAKIDVCVEDETIAYLNRKDVQEALHAKLVGITSWSTCSDILNYDLQNLEIPTISILGALAKSGIRILVYSGDQDSVIPLIGTRSLVNGLAKDFGLNTTVSYRAWFKGRQVAGWTQVYGDILSFATIRGAAHEAPFSQPERSLVLLKAFLEGKPLPEPFF 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02665 463 Gene3D - 310 345 - -
Pumo3g02665 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Pumo3g02665 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 425 438 IPR001563 GO:0004185|GO:0006508
Pumo3g02665 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Pumo3g02665 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Pumo3g02665 463 SUPERFAMILY alpha/beta-Hydrolases 35 459 IPR029058 -
Pumo3g02665 463 Gene3D - 357 455 - -
Pumo3g02665 463 FunFam Carboxypeptidase 26 459 - -
Pumo3g02665 463 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Pumo3g02665 463 Gene3D alpha/beta hydrolase 28 285 IPR029058 -
Pumo3g02665 463 FunFam Carboxypeptidase 356 455 - -
Pumo3g02665 463 Pfam Serine carboxypeptidase 37 455 IPR001563 GO:0004185|GO:0006508
Pumo3g02665 463 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 32 442 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02665 Pumo-Chr3 41518915 41523209 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02665 318 458 Calmodulin-binding Proteins AT2G22960 29.078 1.69e-16 75.9