Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02658 ATGCCTAGAAAAAATAGTCTTAGTGTTGTTGACAAGCATCATGATGAAGTGGAATCTTATATGGAGAAATTAATGAATACTCAAAATTGTTGTGAGTCTCAATCAAATGGTAGCATTGATGTTGAACAAAATGCTGAATCAGGTTCTTTGGAGGCAAGGAAGGTTCGTGGACCTACCTTGTTAAAAGACATATGGAATATGTCTCCGGGAAAGAGAATTGATGTGCAATTTAATAGTCGCAACCAAGCCATAGGAAAGGAGGGTCGGAAGCTTTCTAGTTTTTTGGGCATTTTAGCTAGAAACCCAAGATTAGCTCCTTTAAACATAGAGGATTGGAGACATTTTGATCAAGATCAAAAAAAGAGATTGGTGGAGCTTGTGAGGAGGAAATTCTCAATCTCTGTACGTGGTGAAGAGTTTGTCAAAAAATCAATTGGAAAGAAATGGAAAGATTATAAATGTGAATTAAGGTGTACATATATGACAAAGTACAAGACCAAAGATGCCTTAATGAAAAATAGACCAAAACGTATACCAATGGACCAATGGATCGGTCTTGTTTCTTATTGGCTGTCTGACAAAGCAAAGAAGCGTAGCCAAGCAAATAGATGCAATAGAACAAAGCAAAAGATGTCTCACACTGGTGGATCTAAAAGCATTGGAACTTTAATGGCTGAAAAGGATATGATTCAAATAAAGTTGAACAATGGTGAAACATGTAATGAACAACCCACCGGTAGTGTTGCTTGGAAAGGAGATGTATACTCCCAAGTATTGGGAGAAGAAAGAAGTGGCTATGTTCGTGGCTTGGGACTTGGTCCAACTCCTTCTCAATTATGGGGTACTAAATCTAATATTCTTTCTAGTAACATGACTAATGAGGTAGTACAAATGTTGGAGCAAGAATTGAGGGAGTTAAAGAAGTCAAAGGAGAAACATGATGAAGAAATGGATTTGATGAAACAAAATCAAGACAAGTTAGTATCGGAGTTATCTTTCATGAGAAAAGTGTTAAATAAATATTTTCCTAAGGAGTTATCTATGGCTCAAAACTTTGGAAGCTCATTTGGACAGGTCCATGATACTAATAGTGGTTTTGAACAAGCACATTATGTTGAAAAGAAAATTCCAACTCCTCAAGGTAATATGTTCAAGCCAAGTGGTTCAATCAAGCCTGAGGTATGTTTTGAGGGTCTGGACGAAGGTGATGGAAGATGGCATTATAATTCTGATAATCCAGAGTCTAGTACCTATGCTGCTGGATTAGCACTTGAAGCTTTGGCTGGAGTGATCTCTTTAGCATCTTCTGAAACTGATATTAAGTATGATGAGATCAATGGTATCATGAAAGATTTTGATGAACTTGACCATCTTGCTTCTACTGGCCTCCACCTTGGGGACACCAAATGCATGGTAATCCAAGAAGAGCCAAAAGCCATCATTTGTGAAAAGAAGAATGTGGACCCTAAAACTGGAAAAAGGAAGAAAATTACTGTTTCGGTTGATGATGGTATCGGGACAAACACAAATTTAGCAGATTTTGGGGACACCAAATGCATGGTAATCCACAAAGAGCCAAAAGTTGTCATCCGAGGGAAGAAGAATGTGGACCCTAAAACTGAAAAAAGGAAGAAAAGTACTGCTTCTGTTGATGATATCACTTCCTTGCTAAAGCTTGTGAGAAAAGATAATGATGATGCTGTTCGGAAACTAGCAGCAGAGGCACTTGCCAGTCTTGCCACAGATGGTAATTATTAA 1758 0.3788 MPRKNSLSVVDKHHDEVESYMEKLMNTQNCCESQSNGSIDVEQNAESGSLEARKVRGPTLLKDIWNMSPGKRIDVQFNSRNQAIGKEGRKLSSFLGILARNPRLAPLNIEDWRHFDQDQKKRLVELVRRKFSISVRGEEFVKKSIGKKWKDYKCELRCTYMTKYKTKDALMKNRPKRIPMDQWIGLVSYWLSDKAKKRSQANRCNRTKQKMSHTGGSKSIGTLMAEKDMIQIKLNNGETCNEQPTGSVAWKGDVYSQVLGEERSGYVRGLGLGPTPSQLWGTKSNILSSNMTNEVVQMLEQELRELKKSKEKHDEEMDLMKQNQDKLVSELSFMRKVLNKYFPKELSMAQNFGSSFGQVHDTNSGFEQAHYVEKKIPTPQGNMFKPSGSIKPEVCFEGLDEGDGRWHYNSDNPESSTYAAGLALEALAGVISLASSETDIKYDEINGIMKDFDELDHLASTGLHLGDTKCMVIQEEPKAIICEKKNVDPKTGKRKKITVSVDDGIGTNTNLADFGDTKCMVIHKEPKVVIRGKKNVDPKTEKRKKSTASVDDITSLLKLVRKDNDDAVRKLAAEALASLATDGNY 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02658 585 PRINTS Profilin signature 462 476 IPR005455 GO:0003779
Pumo3g02658 585 PRINTS Profilin signature 438 458 IPR005455 GO:0003779
Pumo3g02658 585 Pfam Plant transposase (Ptta/En/Spm family) 180 227 IPR004252 -
Pumo3g02658 585 PANTHER OS10G0409366 PROTEIN-RELATED 12 289 - -
Pumo3g02658 585 Pfam Profilin 430 485 IPR005455 GO:0003779
Pumo3g02658 585 Gene3D Dynein light chain 2a, cytoplasmic 411 500 - -
Pumo3g02658 585 Coils Coil 289 330 - -
Pumo3g02658 585 SUPERFAMILY Profilin (actin-binding protein) 414 486 IPR036140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02658 Pumo-Chr3 41320051 41323622 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02658 400 494 Cytoskeleton Gene Families AT4G29340 37.374 2.06e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02658 - - ccaj:109811479 468.388