Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02652 ATGGTTTGGAATGATTTGCGGGTGCTTCGTTGTCTCCTCCACCTTGTGGCTTCTTCGGTCTTGTTCCGCGGAACGCAGTGCCAGCAAATAAGCGACCTCGATAACCCCGTGGTTCTGCCACGTGTCACCCAGCTCGTGAATGCCCAAATCTCCAACATGACCTCTCTCCTCAATCACGAAATCAAAACCAGCTCCACTTTCTGCGTCAAAGATCCGGATGCTGATTGGAATAAAGCATTTAATTTTTCTTCTGATTTGGGCTTTGTGTCTTCTTGCATTCTGAAGACTAAAGGAGATATTATGCAGCGCTTGTGTACAGCAGCAGAAATAAAGTTTTACTTAAATAGCTTATTGGAGAGGTCTAGGAGTGCCAACTATTTAAAGCCTAACAAGAACTGTAATTTAAACTCATGGGTATCTGGTTGTGAGCCAGGATGGGCCTGTAGTGTTCCCACAAGCCAGCAAGTTGACCTTCGAAATTCACAGGAGATACCTGCCAGAACTACAAACTGTCAAGCATGTTGTGAGGGGTTCTTCTGTCCTCATGGCATCACATGCATGATACCTTGCCCTCTAGGTTCCTATTGCCCTCTTGCTACACTCAATAACGCAACTGGTGTTTGTGAACCATATCTTTATCAACTGCCTCCAATGCAGCCAAATCATACCTGTGGAGGAGCAAATATTTGGGCTGATGTTAGTAGCAGTAGTGAGATGTTTTGTTCAGCAGGATCGTATTGCTCCAACACTACCAAAAAAATTCCTTGCAGTAGTGGGCATTATTGCAGAATGGGTTCTACATCTGAGCAAAGATGCTTCAAGTTGAGTTCATGTGATGCAAACACTGTGACCCAAAATATTCAGGCTTACGGAATTATGCTCATTGCTGCTTTGAGTACTTTGCTACTCATTATCTACAGCTGTTCTGACCAAGTTCTCACTACTAGAGAAAGGAGAATGGCTAAGTCCAGAGAAGCAGCGGCCAGAAGTGTAAGGAAGACTGCAAATGCACGCCAAAGATGGAAAGATGCAAAAGATGCTGCTAAGAACGGTGCAAGTGGACTGCAAGCTCAACTATCACAAACATTTTCTCGGAAAAAGGACTTTGTAGACCCTGAAGAAATTAAAATTTTGAATCAACCAACTACTGAAACACATATTGAATTGTTTTCACATTCACATCCTATTACCTCAACCACGATTGGTAGTTCATCTGCTGGGCCAAAGGAAAAGGGAAAAGAACCCAGTGATCTGATGCAGACGATACATGAAACAGATAATGATCCAAATATTAGGAACAACATTCGTGTAGAAATAGAAACTAGAGATAAAAATGTTACAGCAAGAGCATCTAAGGAAAAGAAACTGCATACACATAGCCAAATTTTTAAGTATGCATATGCTCAACTTGAGAAAGAGAAGGCTCAGCAACAAGAAAACAAGAACCTTACCTTCTCAGGAGTAATTAGTATGGCTGCCAAAAGTGAACAAAGGAAAAGGCCTTTAATTGAAATATCTTTCAAAGATCTAACTCTCACTTTGAAAGCACACAATAAACATATATTGAGATCTGTTACAGGGAAAATTAAACCTGGCCGCATCACTGCTGTCATGGGTCCATCAGGTGCGGGTAAGACAACTTTTCTTTCAGCAATAGCTGGGAAGGCATTTGGATGCAAGATGACTGGTTCCATTTTTATAAATGGAAAGAATGAATCAATCCACTCCTATAAGAAAATTATTGGCTTTGTGCCACAAGATGATATAGTTCATGGAAACCTGACTGTGGAAGAAAACTTCCGGTTCAGTGCACTGTGCAGGCTACCTGCTGACTTGCCAAAACCAGACAAAGTTCTTATTGTTGAAAGAGTTATTGAATTCTTGGGGCTTCAATCTGTACGGAATTCTTTGGTTGGAACTGTAGAACAGCGAGGGATCTCTGGAGGCCAAAGGAAGCGTGTAAATGTTGGATTGGAAATGGTCATGGAACCTTCACTCATGATCTTGGATGAACCCACATCTGGGTTGGACAGTGCATCATCTCAACTCCTTCTTAGAGCACTAAGACGTGAAGCTCTTGAAGGAGTAAACATTTGCATGGTGGTTCACCAACCCAGCTATGCTTTGTTTAAGATGTTTGATGACTTGATACTCCTGGCAAAAGGTGGACTTACTGTATATCATGGATCAGTCAAGAAAGTTGAAGAATACTTTGCAGACCTTGGGATAAATATTCCAAAGCGCATTAATCCTCCAGATTACTTCATTGACATTTTGGAGGGCATAGAAGTACCTAGTGGAAATTCAGGAGTCAGTTATAAAGAGCTGCCAGTTAGATGGATGCTTCATAATGGATACCCAGTACCCCTTGATATGCAGCAGAATGCAGCACAATTTGGATTGTTTGTAACTGTAAACCCAGCTAAAGAAACAGATCCTGATGGCTCTGGCCATGAAGATAAAAGCTTTGTTGGAGAATTATTGCATGATGTGAGAAATGTTATGGAACTAAAGAGGGAGAAAATACAACTCAATTTTTTAAAATCAAAGGAGTTATCTGACCGTAAAACTCCTGGTATATTCAAGCAATACAAGTACTTCCTTATACGGGTTGGTAAACAGCGATTACGAGAATCTAAGATCCAAGCTATAGATTATTTAATATTATTACTTGCTGGAGCCTGCTTAGGATCACTTACTAAAGCTAGTGATCAGACCTTTGGTGCAGCTGGATACACCTATACAGTGATTGCTGTATCTCTTTTATGCAAAATAGCTGCCTTGAGATCCTTTTCTCTGGATAAATTACACTACTGGAGGGAGAGTGATTCTGGCATGAGCAGCTTGGCATATTTTCTCTCTAAAGACACAATTGATCATTTCAATACAGTGATCAAACCAGTGGTTTACCTCTCTATGTTCTATTTCTTTACCTATCCGAGATCGACTTTTGCAGATAATTACATTGTGCTGCTTTGTCTTGTATATTGTGTGACCGGCATAGCATATGCATTGGCCATACTCTTTGAACCTGGCGCAGCCCAGCTATGGTCAGTGCTTCTTCCAGTTGTTTTCACACTCATTGCAACACAACCAAAAGATAGTAAATTTTTGAAGGATATAGCTGATTTATGCTACTCTAGGTGGGCTTTAGAAGCGTTCATAATTGCAAATGCTGAAAGGTATCATGGGGTGTGGCTCTTAACTCGTTGTGGTTCACTACTGAAACGTGGCTATGATCTTCATGATTGGGGTTTGTGCATATCTATCCTCATTCTCATGGGTGTAATTGCTCGGGTAGTAGCATTTTTCTGTATGCTCATCTTTCTAAAGAAGTAA 3339 0.4094 MVWNDLRVLRCLLHLVASSVLFRGTQCQQISDLDNPVVLPRVTQLVNAQISNMTSLLNHEIKTSSTFCVKDPDADWNKAFNFSSDLGFVSSCILKTKGDIMQRLCTAAEIKFYLNSLLERSRSANYLKPNKNCNLNSWVSGCEPGWACSVPTSQQVDLRNSQEIPARTTNCQACCEGFFCPHGITCMIPCPLGSYCPLATLNNATGVCEPYLYQLPPMQPNHTCGGANIWADVSSSSEMFCSAGSYCSNTTKKIPCSSGHYCRMGSTSEQRCFKLSSCDANTVTQNIQAYGIMLIAALSTLLLIIYSCSDQVLTTRERRMAKSREAAARSVRKTANARQRWKDAKDAAKNGASGLQAQLSQTFSRKKDFVDPEEIKILNQPTTETHIELFSHSHPITSTTIGSSSAGPKEKGKEPSDLMQTIHETDNDPNIRNNIRVEIETRDKNVTARASKEKKLHTHSQIFKYAYAQLEKEKAQQQENKNLTFSGVISMAAKSEQRKRPLIEISFKDLTLTLKAHNKHILRSVTGKIKPGRITAVMGPSGAGKTTFLSAIAGKAFGCKMTGSIFINGKNESIHSYKKIIGFVPQDDIVHGNLTVEENFRFSALCRLPADLPKPDKVLIVERVIEFLGLQSVRNSLVGTVEQRGISGGQRKRVNVGLEMVMEPSLMILDEPTSGLDSASSQLLLRALRREALEGVNICMVVHQPSYALFKMFDDLILLAKGGLTVYHGSVKKVEEYFADLGINIPKRINPPDYFIDILEGIEVPSGNSGVSYKELPVRWMLHNGYPVPLDMQQNAAQFGLFVTVNPAKETDPDGSGHEDKSFVGELLHDVRNVMELKREKIQLNFLKSKELSDRKTPGIFKQYKYFLIRVGKQRLRESKIQAIDYLILLLAGACLGSLTKASDQTFGAAGYTYTVIAVSLLCKIAALRSFSLDKLHYWRESDSGMSSLAYFLSKDTIDHFNTVIKPVVYLSMFYFFTYPRSTFADNYIVLLCLVYCVTGIAYALAILFEPGAAQLWSVLLPVVFTLIATQPKDSKFLKDIADLCYSRWALEAFIIANAERYHGVWLLTRCGSLLKRGYDLHDWGLCISILILMGVIARVVAFFCMLIFLKK 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02652 1112 MobiDBLite consensus disorder prediction 325 355 - -
Pumo3g02652 1112 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 505 747 IPR003439 GO:0005524
Pumo3g02652 1112 FunFam ABC transporter G family member 24 499 741 - -
Pumo3g02652 1112 ProSitePatterns ABC transporters family signature. 646 660 IPR017871 GO:0005524|GO:0016887
Pumo3g02652 1112 MobiDBLite consensus disorder prediction 325 347 - -
Pumo3g02652 1112 Pfam ABC transporter 522 674 IPR003439 GO:0005524
Pumo3g02652 1112 Gene3D - 490 745 IPR027417 -
Pumo3g02652 1112 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 505 738 IPR027417 -
Pumo3g02652 1112 CDD ABCG_EPDR 503 729 - -
Pumo3g02652 1112 MobiDBLite consensus disorder prediction 395 415 - -
Pumo3g02652 1112 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 243 1100 - -
Pumo3g02652 1112 Pfam ABC-2 type transporter 703 1112 IPR043926 GO:0140359
Pumo3g02652 1112 SMART AAA_5 531 723 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02652 Pumo-Chr3 41165295 41180167 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02652 498 706 Calmodulin-binding Proteins AT2G36910 28.037 4.38e-14 75.5