Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02646 ATGGCAAAACACGACATGCCATCATCGTCATCATCGTGTCCTAGAAAGTATGATGTTTTCATCAGCTTCAGAGGTGAGGATGTCCGCGCCAGCTTCATTAGCCATCTTCGTTCTGCTCTCTCCCGAGACAACATCAAATCATACGCTGATGACGATGACCTTGAAAAAGGAGACGAGGTTTGGCCGTCACTCTGCCAAGCAATCCACGATTCACAGCTTTCCATTGTGGTATTCTCCGAAAACTATGCTGATTCAAAATGGTGCTTGAACGAGCTGGTGGAAATACTGCACTGTAGAAAAACTCAGGGAATGGTAATCATGCCCGTGTTCTACGAAGTGGATCCATCACACATAAGAAAGTGTAGTGGCACTTACGGGGAAGCAATCGCAAAACACGAGACATGTTTTGGTGACAAAGACAACGAATTCATCGAAAGGTGGAAAGCAGCTCTCACTGAAGCCGCCAATATATCTGGATGGGACTCTCGTAGCCGTGACTACAAGAATGAATCTCAAGTAATACATAAAATTGTGGAAGATGTATCCGAGAAGTTGAGCCTGAGGTCCCCTGTTAAGCTAAAAGTAGAAGACCTTGTTCAAATTGAAAAAAAATGTGAAGAAGTCAAAATTTTGCTGTCAAAGACCCAAACATATCAGTTACAAAAACATGTTCAAATACAAATGCATGACTTGATACAAGAAATGGGTTTGAATATAGTTCACGAAGGCAGTGAAAATCCCGAAAAATGTAGTCGATTGAGAGATTTAGAAGAAGTTTCTGATGTACTTGAAAATAAAAAAGAATTTAATACTGTTTACTTATTTTGTCAGGGGAGTGATGTAATTGAAGGGATAAAATTAGATTTGTCTTCGATTGAGGATTTACATTTGAATGCTGACTCATTCAACAAGATGACTAATTTAAGAATTCTTAGATTATACATCCCTTCGGGTAAGAGATCAGGAAATGTGCACCACTCTGGCGTCCTTAGTAAATTGTCTGGTAAATTGAGGTACCTTGAGTGGAATGGATTCCATTTGAAGTCTCTTCCAGCAACTTTTTGTGCTAAGGTGCTTGTTGAGATTTGCATGCCGCACAGTCGTGTTACAAAACTTTGGCATGGGGTGCAGGATGTTGCAAATTTAGTGCGAATTGACATAAGTGAATGCAAGCACTTGAAGAATCTCCCAAATTTGTCTAACGCCTCAAAACTTAAATGGGTGAATCTCTCTGGTTGTGAAAGTTTGTGTGATATTCATCCATCTATTTTCTCTTTTGACACACTTGAGACTTTGATACTGGATGGCTGCAAAAAGCTCAAGAGTCTTAAAAGTAAGAAACATTTAACATCTCTGGAGAAGATCAGTGTGAATGGCTGCACCAGTATGAGGAAATTCTCGGTGACATCGAATTCAATCACAAGCTTGGATTTAAGCAGTACAAGAATTGAAATGTTGGACTCTTCAATTGGGCTTCTAAGAAATCTCAAATCACTCAATGTACACGGTTTGAGACGTGGTAATCTTCCAAATGAATTATCTTTACTAACAAATCTTGAGGAGCTTAGGATTTGTAGTTGTAGTGTAGTTATTGACCAACAGAAGTTGCATGTGTTATTTGATGGCTTAAAATCTCTACGACTACTACACTTGAAGGATTGTTGTAACTTGTGTGAGCTCCCTGACAACATCAGTGGCATATCGAACTTATATGAGCTAAGATTAGATGGTAGCTGTGTGAAGACATTGCCTGCTAGCATCAAACTTCTCTATTTTCTGCAAACTTTGTCCTTAGAGAACTGTAGGAATCTTGAGAGTCTACCAAAGCTTCCACCATTGGTCACAGAGTTTAATGCTGTGAACTGCAGGTCATTGAGGACAATATCCACTTTAACAGCTTTTGCATGGAAGACATGGAACAGCAAATTCATTTCATTCATGAAGTGCGTGGGATTGGATGATCCTTCACTCCACTTCATTATGGATGAAGCTCACTTAGCAACAAAAACTGCGGTGTTGCATAATATGACTTTGAATAAAATATATGGAGATAACACTTATAAATCTGTGAAGGTTTGTTTCCCAGGAAGCAGAGTCCCAGGGCAGTTCGAATATCGAACAACACACTCCTCAATCACTATTGATCTTCCTTCTTCCCGATCTAACTTTGTGGGAATAACTTTGTGTGTGGTTCTTTCACCCTCCCCGGGAATGAAGAACCTTGGTGCTAAAATCTGGTGTCAGTGCTACTGGCCAAATGGTACAAGGTTGGGACCCACGACCACATGGTATCATGAAGCTGTCACTGGGTTGATTTCTGATCATGTTTTCATGTGGTTCGAGTCGAGCCACTTTAACAACATCCTCAAAATTTATGAAACTTGTGAACGACAGGTTTCCTTTGAGTTCTTCATTACGAATGATACGGGGGAACGTGTGACCATGGGTACCCCCGAGTGTGGGGTCTGCCTAATATTTGACTCACCAAAAGAATTGTGCCCTCTTAATTTTGCCCCTCCAAGGTTGCACATTCCATATTATTGGCCCAACGGTGAATGA 2559 0.4048 MAKHDMPSSSSSCPRKYDVFISFRGEDVRASFISHLRSALSRDNIKSYADDDDLEKGDEVWPSLCQAIHDSQLSIVVFSENYADSKWCLNELVEILHCRKTQGMVIMPVFYEVDPSHIRKCSGTYGEAIAKHETCFGDKDNEFIERWKAALTEAANISGWDSRSRDYKNESQVIHKIVEDVSEKLSLRSPVKLKVEDLVQIEKKCEEVKILLSKTQTYQLQKHVQIQMHDLIQEMGLNIVHEGSENPEKCSRLRDLEEVSDVLENKKEFNTVYLFCQGSDVIEGIKLDLSSIEDLHLNADSFNKMTNLRILRLYIPSGKRSGNVHHSGVLSKLSGKLRYLEWNGFHLKSLPATFCAKVLVEICMPHSRVTKLWHGVQDVANLVRIDISECKHLKNLPNLSNASKLKWVNLSGCESLCDIHPSIFSFDTLETLILDGCKKLKSLKSKKHLTSLEKISVNGCTSMRKFSVTSNSITSLDLSSTRIEMLDSSIGLLRNLKSLNVHGLRRGNLPNELSLLTNLEELRICSCSVVIDQQKLHVLFDGLKSLRLLHLKDCCNLCELPDNISGISNLYELRLDGSCVKTLPASIKLLYFLQTLSLENCRNLESLPKLPPLVTEFNAVNCRSLRTISTLTAFAWKTWNSKFISFMKCVGLDDPSLHFIMDEAHLATKTAVLHNMTLNKIYGDNTYKSVKVCFPGSRVPGQFEYRTTHSSITIDLPSSRSNFVGITLCVVLSPSPGMKNLGAKIWCQCYWPNGTRLGPTTTWYHEAVTGLISDHVFMWFESSHFNNILKIYETCERQVSFEFFITNDTGERVTMGTPECGVCLIFDSPKELCPLNFAPPRLHIPYYWPNGE 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02646 852 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 160 IPR035897 -
Pumo3g02646 852 Gene3D - 14 190 IPR035897 -
Pumo3g02646 852 ProSiteProfiles TIR domain profile. 15 185 IPR000157 GO:0007165
Pumo3g02646 852 SUPERFAMILY L domain-like 227 626 - -
Pumo3g02646 852 Gene3D Ribonuclease Inhibitor 472 634 IPR032675 -
Pumo3g02646 852 Gene3D Ribonuclease Inhibitor 212 471 IPR032675 -
Pumo3g02646 852 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 471 622 IPR044974 GO:0006952
Pumo3g02646 852 SMART till_3 16 157 IPR000157 GO:0007165
Pumo3g02646 852 Pfam TIR domain 16 199 IPR000157 GO:0007165
Pumo3g02646 852 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 187 - -
Pumo3g02646 852 Pfam C-JID domain 694 828 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02646 Pumo-Chr3 41012483 41017716 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02646 225 825 WRKY Transcription Factor Family AT5G45050 25.741 2.92e-33 136