Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02644 ATGGGTTATTTCTTGTGCACTCGAGATGCTACTCAATGGAGAGATGTCTTGGATAGATTGAAGACAAATCCAAATGATAAAATTATGAATGTACTTCAAATAAGTGTTGATGGACTAGAATATGAGGAAAAAGAAATATTTTTACACATTGCATGTTTCTTTAAAGGGGAGAAGGAAGATTATGTTAAACAAGTTCTAGAATGTTGTGGATTGCACCCTCATATTGGTATTCAAAGAATCATTGAGAAATCCTTGATTACGGTTAGAGATCAAGAAATTCATATGCATATGTTTCAAGAATTGGGAAAGAAAATTGTTCGTGAACAATTTCCTGAAGAGCCAAGATTATGGAGTAGATTATGGCTTTATGAAGATTTCTATCAGGTCTTAATGACGAAAATGGGAACAGATAGTGTTAAAGCCGTAGTTCTGGATCCAAAAGAAGATGTCTTCAAATGTAAGGTTGATGGATTGTCAAAAATGAGGAATCTTAAATTACTCATATTATACCATAAAAAATTTTCAGGAAGCCTCAATTCTCTTTCCAACAAGCTGCGATATCTTTTGTGGCATGGTTATCCTTTTGCTTCTTTACCATTAAATTTTAAGGCCGTTAATCTTGTGGAATTAAATATGCCTAATAATAGCATCAAACGAGTTTGGGAAGGTGGTTGTCCCTCTTCACATAATTTCCCCTGTTTGAAAAGGATGGATTTGAGCAACTCCAAACATCTTTCAGAGACTCCAGATTTTTCAGGGATCCCAAAACTTGAGCGGCTTGATCTTTCAGGATGCACAAATTTATTACATGTCCACCCATCAATTGGACTTCTTGAAAAATTTGCTTTCTTGAGTTTACGAAATTGTAGCAATCTAGTAAACATCAACTTTGGTTGGGGATCTAATCTAAGTTCTCTGGGAGTTGTACATTTCTCTGGTTGTACTAAACTTGAAAACACACCAGATTTTACAAGTGCAACAAATCTTAAGTACCTTGACTTTGATGGATGTACAAGTTTATCCTTGGTTCATGAATCTATTGGAGCTCTTTTAAAACTCACATTCTTGAGTTTGAGAGACTGCAAAAATCTTGTTAGTATACCTAATAATATTAATTCCATGATATCTCTTCAAACTCTAGATTTATGTGGCTGTTTGAAACTTACAAATTTGCCCCTAGGACAAGCTTTCAATTCTTTGTCGTTGGTATCTTTGATATTTTTGGACATAGGCTTTTGCAATCTACTTGAAGTACCAGATGCTATTAGAGTGTTAGGGTGTTTAGAAAGACTGAATCTACAGGGAAACAATTTTGCTTCAATACCTTCCGTCAGTTCGCTACATCATCTATCATATTTGAACTTGTCTCATTGCCATAATCTTGGAACTTTTCCTGACATTCCATCAGGGGGAAGGTATTTTAAAATGGTATCTGGATCTCGTGATCATAGGTCAGGGCTATATGTTTTTGATTGTCCCAAGGTGGCTAATTCGTATCCCATAGAACTTGAATGGCTAATAAGACTAAGTGAGGAGCCCTATCATTTTCGATGTGGCTTTGACATTGTTGTTCCTTGGAGTTGGAGCAATATTCCACGGTGGTTCTATTCAGAATTTGACAGGGGTTCATTTGCAAGGATAAAGAACTTTAATATGGATGACAACTGGATTGGCTTTGCCTTTTGTGTTGTATTTCAGGTAAAAAGTCATCCATATTGTTCATCTTCTTCGTCATCGCCACATCCATTTTATCTTTCTTTTGAAAGTGAACACACAGAAGAATACTTTGATATGTCACTTAATTTGGAGCTGAACAAGATTGATGGAGCAAAACATCTTTGGATCATTTATATCTCTCGGCAACACTGTCATTTTGTGAAAACAGGGGCTCATATCTCATTTAAAGCCCACCCAAGTATTAAAATCATTAAATGGGGGATGAACAGTATATCGAAGCAAGATGTATATGATGACTTTGATATTTCGATGCAACAAGAAGTATCTCTTCAACTCGATCCTAGTGATGTACTACACTCTATTGACTTTGATTGTGTAGAAGACGAAGAGGAAGGCACAAATGAAGACAAAGATGAGAATATTGAATGGAACAGTAGCTCTGGGTGTAAAATCCAGCTTCCTTACAATTGGTTGGTCACTGAGGAAGACCAAGTTGAGAATATTGAAGCAAAGACGAAAGAAAATAATCTCTCCAGTGTGGGGCTTTAA 2226 0.3598 MGYFLCTRDATQWRDVLDRLKTNPNDKIMNVLQISVDGLEYEEKEIFLHIACFFKGEKEDYVKQVLECCGLHPHIGIQRIIEKSLITVRDQEIHMHMFQELGKKIVREQFPEEPRLWSRLWLYEDFYQVLMTKMGTDSVKAVVLDPKEDVFKCKVDGLSKMRNLKLLILYHKKFSGSLNSLSNKLRYLLWHGYPFASLPLNFKAVNLVELNMPNNSIKRVWEGGCPSSHNFPCLKRMDLSNSKHLSETPDFSGIPKLERLDLSGCTNLLHVHPSIGLLEKFAFLSLRNCSNLVNINFGWGSNLSSLGVVHFSGCTKLENTPDFTSATNLKYLDFDGCTSLSLVHESIGALLKLTFLSLRDCKNLVSIPNNINSMISLQTLDLCGCLKLTNLPLGQAFNSLSLVSLIFLDIGFCNLLEVPDAIRVLGCLERLNLQGNNFASIPSVSSLHHLSYLNLSHCHNLGTFPDIPSGGRYFKMVSGSRDHRSGLYVFDCPKVANSYPIELEWLIRLSEEPYHFRCGFDIVVPWSWSNIPRWFYSEFDRGSFARIKNFNMDDNWIGFAFCVVFQVKSHPYCSSSSSSPHPFYLSFESEHTEEYFDMSLNLELNKIDGAKHLWIIYISRQHCHFVKTGAHISFKAHPSIKIIKWGMNSISKQDVYDDFDISMQQEVSLQLDPSDVLHSIDFDCVEDEEEGTNEDKDENIEWNSSSGCKIQLPYNWLVTEEDQVENIEAKTKENNLSSVGL 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02644 741 SUPERFAMILY L domain-like 158 521 - -
Pumo3g02644 741 SUPERFAMILY "Winged helix" DNA-binding domain 26 130 IPR036390 -
Pumo3g02644 741 Gene3D Ribonuclease Inhibitor 151 323 IPR032675 -
Pumo3g02644 741 Gene3D Ribonuclease Inhibitor 324 397 IPR032675 -
Pumo3g02644 741 Gene3D Ribonuclease Inhibitor 398 511 IPR032675 -
Pumo3g02644 741 Pfam Leucine Rich Repeat 206 223 IPR011713 -
Pumo3g02644 741 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 303 467 IPR044974 GO:0006952
Pumo3g02644 741 ProSiteProfiles Leucine-rich repeat profile. 427 448 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02644 Pumo-Chr3 40974297 40978666 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02644 301 466 WRKY Transcription Factor Family AT4G12020 36.905 2.94e-16 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02644 - - var:108332841 926.776