Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02637 ATGGGAATAGAGATTCTGGAGCCTAACACATGCATTAGGGGCTGCTGCAGCAGCCCCTCTATTCCCCTTCATCTCCCTCCCTCTTCTTATGCTCTCCTCTCGCCTATTGCCCGAGGGGCTGAGAGTGTTGTTTATGAAGGGACTTTGAATGGCACGAGGGTTGCTGTGAAGAAACCCATCTTGTCAACTTCAGAAGACATTAATAAGTTTCACAAAGAATTGCAATTGTTATGCAAGTTAGATCATCCGGGAATTGCGACACTGATTGCGGCCCATGCAAAACCACCCAATTACATGTTTTTCTTCAAGTTATATGAATCTCCAAATCTTGCACAGAAGTTACATGTGGAAGAGTGGATCCCAACTCTCAATGAAGCGCTTATGATAGCAATGCGGTTAGCAAAGGCTTTGCAATATCTGCATAACCTCGGGATTGTGCATAGAGATGTGAAACCAGCAAATATTCTTCTTGACAAAAATCTTTGTCCACACCTCACAGATTTTGGATTGGCAGAATACAAGAATGATCTTAAGGGAGTTTCTACTGAGAATTGGAAGTCTTCTGGAAAGCCTACTGGTGGTTTCCACAAAAAGAATATGGTTGGAACACTCATTTACATGGCACCTGAAATATTAAGAAAGGAGTTACATACAGAAAAGTCAGATGTATACAGTTTTGGGATATCAATCAATGAACTCCTGACTGGTGTTGTGCCATATACTGATCTTCGTACAGAAGCGCAGGCTCACACAGTGCTTGAGATGAACTATACTGAGCAGCAATTAACAGCAGCTGTTGTTTCTGATGGATTACGGCCAGTCCTTGCTGCTGAGGACTTGGGTATACCATCAGGATTATTATCAATGATAAACAAATGCTGGGATGCAAATCCTAATAACAGACCTGCTTTTGATGACATTGTCAAGGAACTTGATTTAATTATGAAGCATGGTATGTTAAAGAAGGCAGAAGATATTCATATCAGACCTTGTAACTTGAATGTTGATCAACTTGTAGACAAGACTGATCACCTTCAGGCTTATCAAGAGAGTTTTAGCTGGTCCACTTGTGGCGAACTTTTGGCCAGGAGTGCCTCCAGTGCAAATGGTTCTGGTTTGATAACTAGGTGTGAGTCTTCTGACGAGCCTTCAGTATACCACCCAATACTCTCTTGGGGATCATATGCTACCTGTGGGAGAAGGGAGACTATGGAGGATACACATTTCATTCTGCCCCACATTTGTGATGAAAAGGATGCCTTTGCTTTTGGTATCTTTGATGGCCATAGGGGTGCAGCAGCTGCTGAGTTTTCTTCTAGAGCTGTACCAGCAGTTTTGCAGACTTCAGGTTTTATGGGCAGCAGTCCTGCTAATGCACTAGCGGAAGCATTCATTAGGACAGATGCTGCCTTCAGAAAAGAGCTTGATTCCTATCGCAAATACAACAGATGTATCCAGAAGGATTGGCATCCTGGGTGTACAGCAATTGCTGTGCTTATAGTCAGAAACAAGCTATTTGTTGCTAACATTGGTGATTGCAGGGCAATCTTATGTCGTGCTGGTAATCCAATTGCTCTAAGTAAGGATCATGTTGCAAGCTGTCTTCAAGAGAGAGAGCGTGTTATTCGTCAGGGGGGCCATGTACATTGGCAAGTTGATACTTGGAGGGTTGGTCTTCCTGCACTTCAGGTTACTCGTTCTATTGGTGACGATGATCTGAAGCCTGCTGTAACTGCAGAACCTGAGATAACTGAGAGTACCTTATACCCTGAGGATGAATTTCTGGTCATGGCTAGCGATGGCCTGTGGGATGCTATAAGCAGTATGGAGGTCATAAATATAATAAAAGACACTGTTAAAGAGCCTGGGATGTGCTCTAAGAGGTTGGCTACTGAAGCAGTGGAACGTGGCAGCAAAGATAACATCACAGTTATAGTTGTTTTCTTACGTCCTGTATCTACAGCAGAGAGAATTTATTAG 1980 0.4308 MGIEILEPNTCIRGCCSSPSIPLHLPPSSYALLSPIARGAESVVYEGTLNGTRVAVKKPILSTSEDINKFHKELQLLCKLDHPGIATLIAAHAKPPNYMFFFKLYESPNLAQKLHVEEWIPTLNEALMIAMRLAKALQYLHNLGIVHRDVKPANILLDKNLCPHLTDFGLAEYKNDLKGVSTENWKSSGKPTGGFHKKNMVGTLIYMAPEILRKELHTEKSDVYSFGISINELLTGVVPYTDLRTEAQAHTVLEMNYTEQQLTAAVVSDGLRPVLAAEDLGIPSGLLSMINKCWDANPNNRPAFDDIVKELDLIMKHGMLKKAEDIHIRPCNLNVDQLVDKTDHLQAYQESFSWSTCGELLARSASSANGSGLITRCESSDEPSVYHPILSWGSYATCGRRETMEDTHFILPHICDEKDAFAFGIFDGHRGAAAAEFSSRAVPAVLQTSGFMGSSPANALAEAFIRTDAAFRKELDSYRKYNRCIQKDWHPGCTAIAVLIVRNKLFVANIGDCRAILCRAGNPIALSKDHVASCLQERERVIRQGGHVHWQVDTWRVGLPALQVTRSIGDDDLKPAVTAEPEITESTLYPEDEFLVMASDGLWDAISSMEVINIIKDTVKEPGMCSKRLATEAVERGSKDNITVIVVFLRPVSTAERIY 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02637 659 ProSiteProfiles Protein kinase domain profile. 30 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g02637 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Pumo3g02637 659 ProSiteProfiles PPM-type phosphatase domain profile. 391 649 IPR001932 -
Pumo3g02637 659 FunFam Protein kinase and PP2C-like domain-containing protein 20 344 - -
Pumo3g02637 659 SUPERFAMILY Protein kinase-like (PK-like) 19 317 IPR011009 -
Pumo3g02637 659 SUPERFAMILY PP2C-like 385 651 IPR036457 -
Pumo3g02637 659 SMART serkin_6 30 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g02637 659 SMART PP2C_4 381 647 IPR001932 -
Pumo3g02637 659 Pfam Protein phosphatase 2C 396 642 IPR001932 -
Pumo3g02637 659 Gene3D Transferase(Phosphotransferase) domain 1 23 344 - -
Pumo3g02637 659 Gene3D - 384 654 IPR036457 -
Pumo3g02637 659 CDD PP2Cc 393 649 IPR001932 -
Pumo3g02637 659 Pfam Protein kinase domain 32 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g02637 659 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 24 313 - -
Pumo3g02637 659 FunFam Leucine rich repeat protein phosphatase 2c domain containing protein 382 653 - -
Pumo3g02637 659 SMART PP2C_SIG_2 406 649 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02637 Pumo-Chr3 40690280 40700714 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02637 99 659 PP2C-type Phosphatase Gene Family AT2G40860 63.298 0.0 746
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Pumo3g02637 Pkinase 2.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02637 - - gmx:100785390 1234.94