Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02634 ATGAGAGAAGATGACTCAAATTGGTTCTCAAGGTGGGACGAGGAGCTCCCTCCCCTAGAGGACCTCATGCCTTTATCACAAACCCTAATTAGCCCTGACCTTGCAATAGCCTTTGACATAACAAACCCCTCACAACAACAACAACAACAACAGCAATATTCACAACAAGGACAAGAACAACAGCAACAACAATTTCCTCATCAAGCACCCAACGCCGACGAGGAACCCGCACGCACCCTGAAGCGGCCACGCCTGGTGTGGACCCCACAGCTCCACAAGCGCTTCGTGGACGCCGTGGCCCACCTGGGGATCAAGAACGCCGTGCCCAAGACCATAATGCAGCTCATGAGCGTCGACGGCTTGACCCGCGAGAACGTCGCGAGCCACCTGCAGAAGTACCGCCTCTACTTGAAGCGCATGCAGGGGTTGTCGGCCGGTGGCGGAGTCGGCGGAGCCGCCTCCGCCGACCCCGCCACCGACCACCTCTTCGCCAGCTCGCCCGTGCCGCCGCATTTCCTGCACCCCACGGCGGCACGGCCGGGCTCTGACCACTATTTGCCGTTCGTGTCGGTGCCGGCGCTGCAGCAGCAGCAGCACCGGCACCAACACCGTCAGCACTTGGCGGTGGCCGCTGCTGCGGCAGCTGGCCACCGCCATTTCGGTTCGCCACGGAACGGGCACTTTGAGCTCCCCATTCTGTCGAGAATGGGGGCTCCGGTGGTGCCGGGTTACGCCGCCGCGGCGGCGGAGGACGTGGAATCTGGAGGGAGGAAGGTTCTTACTTTGTTTCCAGCTGGAGATGATTGA 807 0.6109 MREDDSNWFSRWDEELPPLEDLMPLSQTLISPDLAIAFDITNPSQQQQQQQQYSQQGQEQQQQQFPHQAPNADEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAGGGVGGAASADPATDHLFASSPVPPHFLHPTAARPGSDHYLPFVSVPALQQQQHRHQHRQHLAVAAAAAAGHRHFGSPRNGHFELPILSRMGAPVVPGYAAAAAEDVESGGRKVLTLFPAGDD 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02634 268 FunFam Two-component response regulator 78 141 - -
Pumo3g02634 268 MobiDBLite consensus disorder prediction 40 69 - -
Pumo3g02634 268 MobiDBLite consensus disorder prediction 40 80 - -
Pumo3g02634 268 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 138 IPR017930 -
Pumo3g02634 268 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 206 IPR044841 GO:0003700|GO:0006355
Pumo3g02634 268 Gene3D - 79 141 - -
Pumo3g02634 268 Pfam Myb-like DNA-binding domain 86 134 IPR001005 -
Pumo3g02634 268 SUPERFAMILY Homeodomain-like 79 139 IPR009057 -
Pumo3g02634 268 NCBIfam myb-like DNA-binding domain, SHAQKYF class 83 135 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02634 Pumo-Chr3 40553821 40554881 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02634 1 268 G2-like Transcription Factor Family AT3G10760 50.289 4.85e-79 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pumo3g02634 Myb_DNA-binding 1.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02634 - - gmx:100816747 354.755