Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02626 ATGGCGAAGGGTGAAGACGCTTTGATTCGGAAGAAGAACAAGAAGCTACGAAAGAAGAACAACAGCAGCTCTTCCTCTGTCTCCGCCAAGGTTGCCGCCGTCATCGCCGCCAAGAAGCGCCGTAAGGCCGGTAAACGCCGCATGTGCCAGGGGATGTGCTTTAGTCTACCTACTCCGGAAGATCCCTTCAATGATCGAGGTGGGAAAGAGGAATTCAAAACAAATGGTCCTAAAGAGAAAACACATTCGAAACCAAAAGACAAGATGGTTGATCTTAATGGGAAGAGTGCAGATGGAAAGAAAGGCGCAGTTGGTGGGAGGAATATTGCACGGAAATTGAATGATTTACAGAGGGAAAATGAGTCTGTCACAGACAACAATAATCTGAGTCAGAAATGTATCATTAACTCAGAAATGAAAAATATTGAGGTGACTGAGATGGCTCATCTTTGCGGTGCCAAACAGCGTGATTTTGACATTTCAGAGTTCCCTTCTAAGTTTGTTTTTTGGTGTCTAAGTTCAATTGAAAATGCATTGCGACATGGTGATGCCTACACTGATGGAGAGGGTAACTCTTTCTTTCTGAATCCATGGGGATTAGAATTTTTGAAGTGTTATTCTACTGGGAAAGATCTGATGGAGACCAGTGGAACCTCTGCTACTACTGAGCAAATTGCATGGATGGTTTCTGGTGCAGCTGATACTTTTGTCAGAAAAGAGAAAGAAGGGTTGTCCTTTTCTGGTCCTTTTCTTTTATTCCTTGTACCTTCCCAAGAAAAAGCTACCCAGGTTCGAACAGTTTGCAAGCCTTTGAAATCTGTTGGAATACATACAGTGAGTATTCATCCAGGTGCTTCCTTAGATCATCAGATTCAAGGTCTGAAAACTTGTGAGCCTGAGTTTCTTGTTTCTACTCCTGAGAGGCTTTTGGAGCTTGTTTCTATGAAGGCAATTGATATTTCTGGGGTTTCCATGCTGGTTATTGATGGGCTTAGTACTATTTGTAGTGCTGGCCACACTGATACAATAAAATCCATCAAGAAGTGTATTTCTGGCAATCCCCGTCTTGTGATTTTCAACGATTGCTTCAGCCACATGTCGATCCCAATGGTTCGGTATCTTCTGGCAGGATCAATTTGTAGAGTCTCTCTCAATAATTCAATTACCAGCCTAAGTTCATGCATTATCCAGTCTGTTGAAGTGTGTACGTCAGAAGAGGATAAAATTGTCAAGAGCATTGAAGCCCTGGATCAATTTCAGAGCAGCCATACTCAGAATTCAAGCATGCTATATATTTTAAGGAAAGATGTCAAGTGCCATAAATTGGTCAAGACACTCAAATCCAAGGGTTGTTCCATTTCACTTGATTCTGATGCAGCAAGTATCAATGATAGTGTGGATTCAGACAGTGGCAGAGCAGTGGTTTCTGTAATTGATTTGGAGCAAATCTCTACTACGGATATAGGGACATATGATGTAGTAGTCCTACCTAGTTTTGTACCCTCGATTGACACTTACGTGCATATTGTGACAAAGATGGCTCGCCAAAGTGTCAATGGTGTATTGCACAGTTTCTTAACAGAAAGCGATGCAGAACTTGCTGCACCGCTCATCGCGGTTCTTGAACAATGCAGTCAGGAGGTGCCTCAGACCCTTCAGGATCTGCATCATACATCAAACAATGTTGAAGGCGCCTAA 1698 0.4264 MAKGEDALIRKKNKKLRKKNNSSSSSVSAKVAAVIAAKKRRKAGKRRMCQGMCFSLPTPEDPFNDRGGKEEFKTNGPKEKTHSKPKDKMVDLNGKSADGKKGAVGGRNIARKLNDLQRENESVTDNNNLSQKCIINSEMKNIEVTEMAHLCGAKQRDFDISEFPSKFVFWCLSSIENALRHGDAYTDGEGNSFFLNPWGLEFLKCYSTGKDLMETSGTSATTEQIAWMVSGAADTFVRKEKEGLSFSGPFLLFLVPSQEKATQVRTVCKPLKSVGIHTVSIHPGASLDHQIQGLKTCEPEFLVSTPERLLELVSMKAIDISGVSMLVIDGLSTICSAGHTDTIKSIKKCISGNPRLVIFNDCFSHMSIPMVRYLLAGSICRVSLNNSITSLSSCIIQSVEVCTSEEDKIVKSIEALDQFQSSHTQNSSMLYILRKDVKCHKLVKTLKSKGCSISLDSDAASINDSVDSDSGRAVVSVIDLEQISTTDIGTYDVVVLPSFVPSIDTYVHIVTKMARQSVNGVLHSFLTESDAELAAPLIAVLEQCSQEVPQTLQDLHHTSNNVEGA 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02626 565 MobiDBLite consensus disorder prediction 63 95 - -
Pumo3g02626 565 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 12 550 - -
Pumo3g02626 565 MobiDBLite consensus disorder prediction 55 105 - -
Pumo3g02626 565 Coils Coil 106 126 - -
Pumo3g02626 565 Gene3D - 387 560 IPR027417 -
Pumo3g02626 565 MobiDBLite consensus disorder prediction 1 30 - -
Pumo3g02626 565 Gene3D - 240 386 IPR027417 -
Pumo3g02626 565 Pfam DEAD/DEAH box helicase 246 350 IPR011545 GO:0003676|GO:0005524
Pumo3g02626 565 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 244 359 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02626 252 555 Eukaryotic Initiation Factors Gene Family AT1G72730 20.126 3.22e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02626 - - gmx:100809099 923.694