Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02616 ATGATGGTTAGATCCTGTTGGAAGCCAATTGCTGATGGAGATGAAGGAGATGGGAGTGGGAGAGTTGATGGACTTCTATGGTACAAGGATTTGGGGAACCATCTTTATGGGGAATTCTCAATGGCTGTGGTTCAGGCCAATAGTTCATTAGAGGATCGAGGTGAACTTGAGTCTGGACCCTTGAGTTCCAACCACTTGGGTCCTCAAGGGACCTTCATAGGTGTTTATGATGGCCATGGTGGAAGTGAGGCTTCACAGTTTGTTAGTGACAATCTCTTCTGCAATCTCAAAAGGCTTGCAGCTGAACATCAAGGTATGTCAGAACATGTTATCAAAAGGGCTTATTCAGCAACAGAGGAGAGTTTTCTGTCTCTTGTGAAGAAACAGTGGCTGAGTAAGCCACAGATTGCATCCACGGGCACTTGTTGTTTGGTGGGGGTAATTTGCAATGGCATGATATATGTTGCAAATTCTGGAGACTCCCGCGTGGTGTTAGGAAGATTAGAGAAAGCAACAAGGGAAACAGAAGCTATTCAATTATCTACAGAACACAATGTTAACCAAGAATCAGTGAGAGATGAACTTCGATCAAAGCACCCCTTTGATTCACAAATCGTGGTTTTGAGACAAAACGTTTGGCGATGTGAAAGGCCTCATACAGGTTTCACGATCCATAGGGGATGCATATCTGAAGAAAGCAGAATTTAA 708 0.4379 MMVRSCWKPIADGDEGDGSGRVDGLLWYKDLGNHLYGEFSMAVVQANSSLEDRGELESGPLSSNHLGPQGTFIGVYDGHGGSEASQFVSDNLFCNLKRLAAEHQGMSEHVIKRAYSATEESFLSLVKKQWLSKPQIASTGTCCLVGVICNGMIYVANSGDSRVVLGRLEKATRETEAIQLSTEHNVNQESVRDELRSKHPFDSQIVVLRQNVWRCERPHTGFTIHRGCISEESRI 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02616 235 Gene3D - 29 217 IPR036457 -
Pumo3g02616 235 ProSiteProfiles PPM-type phosphatase domain profile. 35 235 IPR001932 -
Pumo3g02616 235 SMART PP2C_4 32 235 IPR001932 -
Pumo3g02616 235 PANTHER PROTEIN PHOSPHATASE 30 215 IPR015655 GO:0004722|GO:0006470
Pumo3g02616 235 CDD PP2Cc 36 212 IPR001932 -
Pumo3g02616 235 SUPERFAMILY PP2C-like 64 203 IPR036457 -
Pumo3g02616 235 ProSitePatterns PPM-type phosphatase domain signature. 72 80 IPR000222 GO:0043169
Pumo3g02616 235 Pfam Protein phosphatase 2C 56 190 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02616 Pumo-Chr3 39422817 39425587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02616 2 216 PP2C-type Phosphatase Gene Family AT3G12620 61.468 4.08e-97 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02616 K01102 - gmx:100819870 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02616 3 39422817 39425587 Pumo3g02616 3 39422817 39425587 ECH
Pumo5g03001 5 78030074 78031934 Pumo3g02616 3 39422817 39425587 PCT