Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02587 ATGTCTTTCCACAATCAAGCATTTTGGACGGGGAAGAGTCCTGGGTGTTATAATGATGGTGACACGACTAATGACAATTCTTCTAGAACTGAGTCCAAGCGTGCTCATCAGTGGTTCATGGATGACCCTGAAGTGGATCTGTTTCCCAATAAGAAACAAGCAGTAGAGGCTCCAAACAATTTGTTATCTGGAATGCTCAACTCCAATATTTCTTCGTGGGGAAATTCCTCAGGATTTCACTCTTTAAATGGTCATTTTACCGAACAATTATTTGCCCCAGATGCAGCAACTATGAATTTTGAAGACACAAACACCCCCTCTGTTAGCATAGATGATAAGTTGAGTGTGGAAGGAAAGGATAACATGGATCCCTTTGGGAGTGAGTCCTCATTCGGTTTATCCATCTCAACTGCATTAGAAGATCCTCATTTAGTTTTTAGTTATGATGGAATTAGAAAAGTCAAAGTTAATGAGGTGAAGGAATCTGAGAATGTCATGCCTGTTACTACAAATAATCCCTATGATAGGGGTGTTAGTGACAGTGTCTCAAATCCTTGTCTATACAAGGGGGATGATAATTCCATATCAACGAGTCTCGCCTACAACGAAGGGGTTGCCAATATAATGGATGGCACATATGACAGGACAGATAACAATTTCATGTCAATGAGTCAATCCTATAACAAGGGAAATGACAGCTTATCTCCAACATTCAATGAGATTTGTAATACGATATCAATGGATCTGGGTTTCAGTAAGGTAGATAGTAATGTAACATCTATTGCTCAAGCTTACAACAAGGCCTATGACAATTCCGTGTTAACTAACCACTTATACAATAAGGTTGATAATGGCACTATATCATTGCATCACACCTACCACAAGCAGGAAAATGATGTGCCATTTGTTTCACATTCCTATAATAATGGAGAGAGCACTATCATATCCTTTGGTGGCTGTGATGATGATACAACTCCCTCTGACTTATTCATTTCTGACTATGATCTGTTGATGTGTCAAGCACTTTCACATAAGTCAGAGGCTGTGAATGAGAAGGAGTTGGTTAGATCTAGTTCTAATTTACTTCCAAGTACAGCTCAGACATCTGCACCTGAAACTGAAAATGTTCCCAAGACAAAAGGGGAGATAAAAATGTCTAAAAAAGCTACTTCAAACAACTTCCCTTCAAACGTCAGAAGTTTGCTATCCACTGGTATGCTGGATGGTCTCTCAGTAAAGTATAAAGCGTGGTCACGGGAGAAGGAACTTCGAGGTGTTATAAAAGGTGCTGGCTATTTGTGCAGTTGTCACTCGTGTAATTTTTCCAAGGTTATTAATGCTTTTGAATTTGAGCGACATGCTGGTTGCAAGACAAAACACCCCAATAATCACATTTACTTTGATAATGGGAAAACTATATATGGGGTTGTACAAGAGCTCAGGAGCACTCCACAGAGCATGTTGTTTGAAGTTATTCAGACTATAACTGGTTCACCTATCGATCAGAAATCCTTCTGCATTTGGAAAGAATCTTTTTTGGCCACAGCAGGGAACTCCAGTGCATATGTGCAAAACAAGAAGTAA 1584 0.3946 MSFHNQAFWTGKSPGCYNDGDTTNDNSSRTESKRAHQWFMDDPEVDLFPNKKQAVEAPNNLLSGMLNSNISSWGNSSGFHSLNGHFTEQLFAPDAATMNFEDTNTPSVSIDDKLSVEGKDNMDPFGSESSFGLSISTALEDPHLVFSYDGIRKVKVNEVKESENVMPVTTNNPYDRGVSDSVSNPCLYKGDDNSISTSLAYNEGVANIMDGTYDRTDNNFMSMSQSYNKGNDSLSPTFNEICNTISMDLGFSKVDSNVTSIAQAYNKAYDNSVLTNHLYNKVDNGTISLHHTYHKQENDVPFVSHSYNNGESTIISFGGCDDDTTPSDLFISDYDLLMCQALSHKSEAVNEKELVRSSSNLLPSTAQTSAPETENVPKTKGEIKMSKKATSNNFPSNVRSLLSTGMLDGLSVKYKAWSREKELRGVIKGAGYLCSCHSCNFSKVINAFEFERHAGCKTKHPNNHIYFDNGKTIYGVVQELRSTPQSMLFEVIQTITGSPIDQKSFCIWKESFLATAGNSSAYVQNKK 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02587 527 MobiDBLite consensus disorder prediction 14 34 - -
Pumo3g02587 527 MobiDBLite consensus disorder prediction 360 379 - -
Pumo3g02587 527 Pfam Tify domain binding domain 425 480 IPR032308 -
Pumo3g02587 527 PANTHER AUTOIMMUNE REGULATOR 8 472 - -
Pumo3g02587 527 MobiDBLite consensus disorder prediction 360 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02587 Pumo-Chr3 39011402 39015019 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02587 375 512 PHD Transcription Factor Family AT3G53680 54.348 2.70e-43 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02587 - - gmx:100794765 932.554