Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02579 ATGTCTTTCCACAATCAAGCATTTTGGACGGGGAAGAGTCCTGGGTGTTATAATGATGGTGACACGACTAATGACAATTCTTCTAGAACTGAGTCCAAGCGTGCTCATCAGTGGTTCATGGATGACCCTGAAGTGGATCTGTTTCCCAATAAGAAACAAGCAGTAGAGGCTCCAAACAATTTGTTATCTGGAATGCTCAACTCCAATATTTCTTCGTGGGGAAATTCCTCAGGATTTCACTCTTTAAATGGTCATTTTACTGAACAATTATTTGCCCCAGATGCAGCAACTATGAATTTTGAAGACACAAACACCCCCTCTGTTAGCATAGATGATAAGTTGAGTGTGGAAGGAAAGGATAACATGGATCCCTTTGGGAGTGAGTCCTCATTCGGTTTATCCATCTCAACTGCATTAGAAGATCCTCATTTAGTTTTTAGTTATGATGGAATTAGAAAAGTCAAAGTTAATGAGGTGAAGGAATCTGAGAATGTCATGCCTGTTACTACAAATAATCCCTATGATAGGGGTGTTAGTGACAGTGTCTCAAATCCTTGTCTATACAAGGGGGATGATAATTCCATATCAACGAGTCTCGCCTACAACGAAGGGGTTGCCAATATAATGGATGGCGCATATGACAGGACAGATAACAATTTCATGTCAATGAGTCAATCCTATAACAAGGGAAATGACAGCTTATCTCCAACATTCAATGAGATTTGTAATACGATATCAATGGATCTGGGTTTCAGTAAGGTAGATAGTAATGTAACATCTATTGCTCAAGCTTACAACAAGGCCTATGACAATTCCGTGTTAACTAACCACTTATACAATAAGGTTGATAATGGCACTATATCATTGCATCACACCTACCACAAGCAGGAAAATGATGTGCCATTTGTTTCACATTCCTATAATAATGGAGAGAGCACTATCATATCCTTTGGTGGCTGTGATGATGATACAACTCCCTCTGACTTATTCATTTCTGACTATGATCTGTTGATGTGTCAAGCACTTTCACATAAGTCAGAGGCTGTGAATGAGAAGGAGTTGGTTAGATCTAGTTCTAATTTACTTCCAAGTACAGCTCAGACATCTGCACCTGAAACTGAAAATGTTCCCAAGACAAAAGGGGAGATAAAAATGTCTAAAAAAGCTACTTCAAACAACTTCCCTTCAAATGTCAGAAGTTTGCTATCCACTGGTATGCTGGATGGTCTCTCAGTAAAGTATAAAGCGTGGTCACGGGAGAAGGAACTTCGAGGTGTTATAAAAGGTGCTGGCTATTTGTGCAGTTGTCACTCGTGTAATTTTTCCAAGGTTATTAATGCTTTTGAATTTGAGCGACATGCTGGTTGCAAGACAAAACACCCCAATAATCACATTTACTTTGATAATGGGAAAACTATATATGGGGTTGTACAAGAGCTCAGGAGCACTCCACAGAGCATGTTGTTTGAAGTTATTCAGACTATAACTGGTTCACCTATCGATCAGAAATCCTTCTGCATTTGGAAAGAATCTTTTTTGGCCACAGCAGGGAACTCCAGTGCATATGTGCAAAACAAGAAGTAA 1584 0.3939 MSFHNQAFWTGKSPGCYNDGDTTNDNSSRTESKRAHQWFMDDPEVDLFPNKKQAVEAPNNLLSGMLNSNISSWGNSSGFHSLNGHFTEQLFAPDAATMNFEDTNTPSVSIDDKLSVEGKDNMDPFGSESSFGLSISTALEDPHLVFSYDGIRKVKVNEVKESENVMPVTTNNPYDRGVSDSVSNPCLYKGDDNSISTSLAYNEGVANIMDGAYDRTDNNFMSMSQSYNKGNDSLSPTFNEICNTISMDLGFSKVDSNVTSIAQAYNKAYDNSVLTNHLYNKVDNGTISLHHTYHKQENDVPFVSHSYNNGESTIISFGGCDDDTTPSDLFISDYDLLMCQALSHKSEAVNEKELVRSSSNLLPSTAQTSAPETENVPKTKGEIKMSKKATSNNFPSNVRSLLSTGMLDGLSVKYKAWSREKELRGVIKGAGYLCSCHSCNFSKVINAFEFERHAGCKTKHPNNHIYFDNGKTIYGVVQELRSTPQSMLFEVIQTITGSPIDQKSFCIWKESFLATAGNSSAYVQNKK 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02579 527 PANTHER AUTOIMMUNE REGULATOR 8 472 - -
Pumo3g02579 527 MobiDBLite consensus disorder prediction 14 34 - -
Pumo3g02579 527 MobiDBLite consensus disorder prediction 360 379 - -
Pumo3g02579 527 Pfam Tify domain binding domain 425 480 IPR032308 -
Pumo3g02579 527 MobiDBLite consensus disorder prediction 360 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02579 Pumo-Chr3 38907910 38911522 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02579 375 512 PHD Transcription Factor Family AT3G53680 54.348 2.78e-43 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02579 - - gmx:100794765 930.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02579 3 38907910 38911522 Pumo3g02579 3 38907910 38911522 ECH
Pumo3g02579 3 38907910 38911522 Pumo5g00532 5 10984180 10988937 ECH