Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02578 ATGGAGGATCACCAGACACAAAATTGGTTCGAAAGAGTGAAGCCTTTCGCAGCTGTGGTATCAATGCAGTTTGGATATGCAGCTATGGATGTTCTATCCAAGGCTGCAATGAACAAAGGGATGAGCAATTATGTGTTTGTCGTTTATCGCCATGCTGTTGCATTCTTTGTCATGACCCCCTTGGCATTCTTTTTTGACAAGAAAGTTAGGCCAAAGATGACATTGTCAATTTTCATGAAGATAGCCGTGCTCAGCTTGCTAGAGCCAGTTATTGACCAGAATTTGTATTTTTTGGGGATGAAGTACACAACAGCAACCTTTGCCGTTACCATGACCAATATGCTTCCTGCCATTACCTTCATCTTCGCATGCATTCTTAGGCTTGAGAAGATAAAAATAAGAAGTATACGCAGCCAAGCAAAGGTGGTAGGAACTCTAGCAACTGTTTCGGGTGCCATGGTCATGACATTGCTGAAAGGTCCAGTACTTTTCGGGTCACAAGGAAGCAATGATCACAGCCAACGTAATGGGACAAGTATGCAACATACAATAACTGGATTCATAATGATCACAATTGGATGCTTTAGTTGGGCTTGTTTCGTGATCCTACAAGCTATTACCCTGAAAACCTACCCTGCTGAACTCTCTCTTTCTGCGTGGATATGCCTAATGGGAACAATTGAAGGTGCTGCAGTGGCTATGATTATGGAAAGGGGCAACCCTTCAGTTTGGTCTCTAAAATTGGATATGAAACTGCTATGTGCTGTGTACACTGGCATAGTCTGCTCTGGAGTGGGCTATTACTTGCAAGGCGTTGTGATGAAAACTAGAGGCCCAGTCTTCGTAACAGCATTTAGTCCCCTCTGCATGGTAATCGTGGCTGTCATGAGCTACTTCATTCTGGCTGAACAAGTGTTCCTCGGAAGATTGATCGGTGCCATTATCATTTGTTTGGGCCTATACGCTGTGGTGTGGGGTAAAAGCAAAGATTACAGCCCACCAAGCCCAAATACTCAAGAGCCCATATTACCGGCAAAGCAAATAGTGAACGAGGGCAATGCAAAGAAGGAAAATTGCAATTGCACTCACGAAGTCAACACCCTCAGCAATTTTGGAAATGGAATCACTAGAAATGAAGAACAAGTGTGA 1149 0.4369 MEDHQTQNWFERVKPFAAVVSMQFGYAAMDVLSKAAMNKGMSNYVFVVYRHAVAFFVMTPLAFFFDKKVRPKMTLSIFMKIAVLSLLEPVIDQNLYFLGMKYTTATFAVTMTNMLPAITFIFACILRLEKIKIRSIRSQAKVVGTLATVSGAMVMTLLKGPVLFGSQGSNDHSQRNGTSMQHTITGFIMITIGCFSWACFVILQAITLKTYPAELSLSAWICLMGTIEGAAVAMIMERGNPSVWSLKLDMKLLCAVYTGIVCSGVGYYLQGVVMKTRGPVFVTAFSPLCMVIVAVMSYFILAEQVFLGRLIGAIIICLGLYAVVWGKSKDYSPPSPNTQEPILPAKQIVNEGNAKKENCNCTHEVNTLSNFGNGITRNEEQV 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02578 382 PANTHER WAT1-RELATED PROTEIN 14 331 IPR030184 GO:0016020|GO:0022857
Pumo3g02578 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 154 - -
Pumo3g02578 382 Pfam EamA-like transporter family 185 324 IPR000620 GO:0016020
Pumo3g02578 382 Pfam EamA-like transporter family 23 136 IPR000620 GO:0016020
Pumo3g02578 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02578 Pumo-Chr3 38902733 38907568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02578 1 373 Nodulin-like Gene Family AT2G37460 62.133 1.05e-169 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02578 - - gmx:100811147 704.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02578 3 38902733 38907568 Pumo3g02578 3 38902733 38907568 ECH