Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02567 ATGGCGGCGGCGGCGCGGCGACTCCGGGACCTGCAGTCCCAGGCGGCGAACAAGATCTGCGTGGACTGCTCCCAGAAGAACCCGCAGTGGGCCTCGGTCTCGTACGGCGTGTTCATGTGCCTGGAGTGCTCCGGCAAGCACCGCGGCCTCGGCGTCCACATCTCCTTCGTCCGATCCGTCACCATGGACTCCTGGTCCGACATCCAGATCAAGAAAATGGAGGCCGGCGGCAACGACAAGCTCAACGCTTTTCTCGCGCAGTACTCAATCCCCAAGGAGACCGACATCGTCACCAAGTACAACACCAGCGCCGCCGCTGTCTACCGCGATCGGATCCAGGCCGTCGCCGAGGGCCGCCCCTGGCGCGACCCGCCGGTCGTCAAGGAGAACCTCTCCGGCGCCGGGAAGGGGAAGCCGCCGCTGACGCAGGCGCGGAGGAGCAGCAACAACGATGCGGGATGGGATGATTGGGACAACGAGGGGAGTCCCCGGAGCAGGTCGACCGGGGACTTTAGGAGCCTGAACGGCGGCGGCGCGCCGGCGAGGTCGCGGTCGACGGAGGACATCTACTCGCGGTCGCAGCTGGAGGCGTCGGCGGCGAACAAGGAGAGCTTCTTCGCGCGGAAGATGGTGGAGAACGAGTCGCGGCCGGAGGGGCTGCCGCCCTCGCAGGGAGGGAAGTATGTCGGGTTTGGATCCAGTCCGCCGCCGCCTCAGCGGAGGAATGTTGATGCGCAAAACGATTATTTCTCTGTCGTTTCGCAGGGGATTGGGAAGTTGTCTTTGGTTGCTGCCTCTGCGGCTCAGTCTGCTGCTAATGTTGTTCAGGCTGGCACGAAGGAGATCACTACTAAGGTCAAGGAAGGTGGTTATGATCATAAGGTCAATGAAACTGTCACTGTTGTCACTCAAAAGACATCAGAGATTGGACAGAGGACTTGGGGCATAATGAAAGGAGTCATGGCTATGGCTTCCCAGAAGCTCGAGGAGTACACTAAAGATGATCCAAACTGGAAGAATGATAGCTGGCAACGAAATGAGAATGATAGAAATGGTTATTATCAGGATTTTAATCAAGAGAACAAAGGCTGGAATTCTTCTACTGGAAGAGAACAATCTTCATCAGGGCAATATAAAACTCACAGCTCAAGCTCTTGGGATGATTGGGACCACCAAGATAGCAGGAAAGAAGAACCAGCTAAAGCATCAACTCATTCATCAGGTGGGCAATTTAGTAGTACCCACAACTCAAGCTCTTGGGATGATTGGGCACACTCAGATTCTAGGAAGGAAGAACCAGCTAAAGGATCAGCTCCCCATAATAATGATGGTTGGGCTGGCTGGGATAATGCCAAAGATGATGGATTTGATAATTTTTATGAAGGTGCATCTAATAAGAAAGGTGTTGGTCATAATGGGAAATCAGATGGCGCTTGGACAGAGGGAGGCTTTCTCTAA 1458 0.5528 MAAAARRLRDLQSQAANKICVDCSQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWSDIQIKKMEAGGNDKLNAFLAQYSIPKETDIVTKYNTSAAAVYRDRIQAVAEGRPWRDPPVVKENLSGAGKGKPPLTQARRSSNNDAGWDDWDNEGSPRSRSTGDFRSLNGGGAPARSRSTEDIYSRSQLEASAANKESFFARKMVENESRPEGLPPSQGGKYVGFGSSPPPPQRRNVDAQNDYFSVVSQGIGKLSLVAASAAQSAANVVQAGTKEITTKVKEGGYDHKVNETVTVVTQKTSEIGQRTWGIMKGVMAMASQKLEEYTKDDPNWKNDSWQRNENDRNGYYQDFNQENKGWNSSTGREQSSSGQYKTHSSSSWDDWDHQDSRKEEPAKASTHSSGGQFSSTHNSSSWDDWAHSDSRKEEPAKGSAPHNNDGWAGWDNAKDDGFDNFYEGASNKKGVGHNGKSDGAWTEGGFL 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02567 485 CDD ArfGap_ArfGap1 4 118 - -
Pumo3g02567 485 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 2 407 IPR044519 GO:0005096|GO:0016192
Pumo3g02567 485 MobiDBLite consensus disorder prediction 347 383 - -
Pumo3g02567 485 MobiDBLite consensus disorder prediction 212 242 - -
Pumo3g02567 485 MobiDBLite consensus disorder prediction 332 346 - -
Pumo3g02567 485 MobiDBLite consensus disorder prediction 422 437 - -
Pumo3g02567 485 MobiDBLite consensus disorder prediction 403 421 - -
Pumo3g02567 485 Gene3D Arf GTPase activating protein 1 127 IPR038508 -
Pumo3g02567 485 ProSiteProfiles ARF GTPase-activating proteins domain profile. 5 121 IPR001164 GO:0005096
Pumo3g02567 485 MobiDBLite consensus disorder prediction 119 194 - -
Pumo3g02567 485 PRINTS HIV Rev interacting protein signature 36 53 IPR001164 GO:0005096
Pumo3g02567 485 PRINTS HIV Rev interacting protein signature 17 36 IPR001164 GO:0005096
Pumo3g02567 485 PRINTS HIV Rev interacting protein signature 57 78 IPR001164 GO:0005096
Pumo3g02567 485 SMART arf_gap_3 5 121 IPR001164 GO:0005096
Pumo3g02567 485 MobiDBLite consensus disorder prediction 384 402 - -
Pumo3g02567 485 FunFam ADP-ribosylation factor GTPase-activating protein 1 130 - -
Pumo3g02567 485 MobiDBLite consensus disorder prediction 151 165 - -
Pumo3g02567 485 MobiDBLite consensus disorder prediction 332 485 - -
Pumo3g02567 485 Pfam Putative GTPase activating protein for Arf 6 106 IPR001164 GO:0005096
Pumo3g02567 485 SUPERFAMILY ArfGap/RecO-like zinc finger 6 115 IPR037278 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02567 Pumo-Chr3 38744865 38748326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02567 6 92 C2H2 Transcription Factor Family AT4G21160 50.000 1.23e-22 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02567 K12492 - gmx:100806519 877.856