Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02564 ATGGCTGATTCCACTCCGACTGCAGCTCCTCCAAACGACGCCGAATCATGCTCTTTCCAACGAACGGTCACCTTATACGATTGGTGGTTGATTAAAGCCAAAAACGACTTCCAAGGAAAGCGTTTAGCCGTCGCGGGCGTCTCGTCGAGAAAGGATGAGGCATTGCGCGTGTTTGTTTCTGCTGCTGTTATCAAAAGGTATGACGTGTTTTCTCTCGAGACTGCGGATGGGAAATGCGTTATAATCAGTGGCTTCATCAACGAGCAGCGCACTCTCGAAAATGGTTTTGCCTCCGAGGTTTTCAACCGTTTTTTATTTGGCTTTCCTCCAGACTGGGAAAGCTATGCTCTAGATTGCTTCAGAGAAGAATCTACCACTGGCACTGATTTGGGTAGTCCTGTTCCTGTATCAGCTGGTTGTCCAGAAATTTTATCTGATCGTGTGGAAAAATCTATTCCTACTTCTTTGGTATCACCAGAGGAGACCCCGGGAGATCACGAGAAGTCATTCCCTGAGAATGAATGCAACGTGTCAAAGGAGATGGGTGGGGTTAATGTTGCTTGCAATAGTGGTGGGAAAAAACATAGTTCCAGGTTGCATGATATTAAAGTATGCCAGCAGAAGAAGCAGCCTGCTTCTGAAGGTCTTCTGAAGCATCCAGATAATAAGAACTCTATTTCAGTGGCCTTGGAGAATTGTGATGTAGAGGGACGGAAAAGTCCAGCAACACCCATTCAGTCACAATTGTGGAGTGAATATTCAAATGATGCTTGTGTGGAAAATTCCATTCCTACTTCTTTGGCATCACCAGAGGAGGTCCCGGGAGATCACGAAAAGTCATTCCCTGAAAATGAATGCAACGTGTCAAAGGAGATGGGTGGGGTTAATGTTGCTTGCAGTAGTGGTGGGAAAAAACATAGTTCCAGGTTACATGATAGTAAAGTATGCCAGCAGAAGAAGCGGCCTGCTTCTGGAGGTCCTCTGAAGCATCCAAATAATGAAAACTCTACTTCAGTGGCCTTGGAGAATTGTGATATAGAGGGACTGAAAAGTCCGGCAACACCCATTCAGTCACAATCATCGAGACAACTAAGCACGTCACCTGAGCAGCTAGTTAAAAAATCTGCATCCAGATTTTCTAGAAAATTGTCACCAAAGACTGAAGGCTGTTATAAGAAAAAGAGAGTGACAGTTGAAACAAAAGTGGTCAGGCCTAAGGGAAAACTGAATAAATCTGCATCTGCTATGAAAAATCCGCGAGAAAAGGATCTAAGCCACTTGACCAAGGGAAGCCAACAGAAAAAATCCACAGTTACTCCAGAGTCGTCGAGTTTCAGAAAATCCAGATCCGGTAGGTTGCTTCTACCTCCCTTAGAGTTTTGGCGCAATCAAATACCAATTTATAACGCGGACCATGAGATTACAGAAATTCAGGATGGTGCATCTTTGATATCACCTTGTAGAGGTTTTTCACCATCACTAAGCAGGTTTAGCAATCAGAAACGTGGAATGTGA 1515 0.4436 MADSTPTAAPPNDAESCSFQRTVTLYDWWLIKAKNDFQGKRLAVAGVSSRKDEALRVFVSAAVIKRYDVFSLETADGKCVIISGFINEQRTLENGFASEVFNRFLFGFPPDWESYALDCFREESTTGTDLGSPVPVSAGCPEILSDRVEKSIPTSLVSPEETPGDHEKSFPENECNVSKEMGGVNVACNSGGKKHSSRLHDIKVCQQKKQPASEGLLKHPDNKNSISVALENCDVEGRKSPATPIQSQLWSEYSNDACVENSIPTSLASPEEVPGDHEKSFPENECNVSKEMGGVNVACSSGGKKHSSRLHDSKVCQQKKRPASGGPLKHPNNENSTSVALENCDIEGLKSPATPIQSQSSRQLSTSPEQLVKKSASRFSRKLSPKTEGCYKKKRVTVETKVVRPKGKLNKSASAMKNPREKDLSHLTKGSQQKKSTVTPESSSFRKSRSGRLLLPPLEFWRNQIPIYNADHEITEIQDGASLISPCRGFSPSLSRFSNQKRGM 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02564 504 MobiDBLite consensus disorder prediction 298 336 - -
Pumo3g02564 504 MobiDBLite consensus disorder prediction 404 449 - -
Pumo3g02564 504 MobiDBLite consensus disorder prediction 352 374 - -
Pumo3g02564 504 MobiDBLite consensus disorder prediction 415 429 - -
Pumo3g02564 504 Pfam SANTA (SANT Associated) 23 115 IPR015216 -
Pumo3g02564 504 PANTHER MIS18-BINDING PROTEIN 1 18 484 IPR039110 -
Pumo3g02564 504 MobiDBLite consensus disorder prediction 350 386 - -
Pumo3g02564 504 MobiDBLite consensus disorder prediction 430 449 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pumo3g02564 SANTA 1.2e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02564 - - gmx:100790080 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02564 3 38720101 38724636 Pumo3g02564 3 38720101 38724636 ECH