Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02562 ATGTCTCTGCCTGAAGACAAAACTACTGGACAAAAGAACAAGATCACCATTACCAACGATAAGGGTAGGTTGTCAAAGGAAGAGATCGAGAAGATGGTTCAAGAGGCCGAGAAGTACAAATCTGAAGATGAAGAGCACAAGAAGAAGGTAGAGGCCAAGAATGCATTGGAGAACTACGCATACAACATGAGGAACACCGTGAAGGATGAGAAGATTGGAGGAAAACTCAACCCAGCTGACAAGAAAAAGATTGAGGATGCCATTGAGCAGGCCATCCAGTGGCTAGACAGCAACCAGCTTAGAGAGGCAGATGAGTTTGAGAACAAAATGAAGGAATTGGAAAGCATCTGCAACCCTATCATTGCTAAGATGTACCAGGGTGGTGCTGGTCCAGACGTGGGAGGTGTTTTTTTTTTTTTTTCTGATCAGCCAATAAAAGAGATATATCAATAA 453 0.4305 MSLPEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGGKLNPADKKKIEDAIEQAIQWLDSNQLREADEFENKMKELESICNPIIAKMYQGGAGPDVGGVFFFFSDQPIKEIYQ 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02562 150 MobiDBLite consensus disorder prediction 1 21 - -
Pumo3g02562 150 FunFam heat shock cognate 70 kDa protein-like 53 127 - -
Pumo3g02562 150 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 51 132 IPR029048 -
Pumo3g02562 150 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 4 53 IPR029047 -
Pumo3g02562 150 Coils Coil 29 49 - -
Pumo3g02562 150 Pfam Hsp70 protein 5 126 IPR013126 GO:0005524|GO:0140662
Pumo3g02562 150 MobiDBLite consensus disorder prediction 1 18 - -
Pumo3g02562 150 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 6 57 IPR029047 -
Pumo3g02562 150 PANTHER HEAT SHOCK PROTEIN 70KDA 5 91 IPR013126 GO:0005524|GO:0140662
Pumo3g02562 150 Gene3D - 54 127 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02562 Pumo-Chr3 38707921 38708373 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02562 5 135 Calmodulin-binding Proteins AT3G12580 87.786 9.97e-75 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02562 K03283 - gmx:100804917 257.299