Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02547 ATGCAGATGCTCATAGACAAAGAAATGTCCAAACAAAAAGACTCCAAGCACAACCTACCAAATGTAGTAGCAAAACTAATGGGGCTTGAAACCCTTCAAAGGGGAGAGCCTAATTTATCTATGGAGAGAAGCCACGGAAGAGATTATTCTCAACATGTGTATGGTCCTATAGGCTTACCATTCAGACATTGGCAGCAGGAAGATAGGTTTATGGATAGGGAAATGCTTCATGAAGCTCATCCAAGCACAGAACAGGTTTCTTACAAAGATATGTATGAAATATGGCAGCAAACTCAGAGAGCAAGCCATGTAAGGGGCAATATACCTGATACTGATAGAGGAAGGTGGAGTGAAGATGTTGATGGGAAAAGAATGGCTCTCATTCGTCAGAAGTTCATGGAAGCAAAACGTCTGTCAACCGATGAGAGACTGCGCCAATCCAAACAATTTAAAGATGCCTTGGAAGTTTTAAGCTCCAATAGTGATCTCTTAATCAGGTTATTGGATTCTCAAAATGTTTGTGATATATACTCAACTTCACCTATTGAGACAAAGCGCATTACTCTTATTAAACCTTTGAAGATGGTTGACAATGACAAATCTGCCAGAAAGGAGAAAAAGAACAATAGAGTGATTAAGAAACCAGCAAGTGTTGATCAAGCAGCTGTATGGGAGAACAAGAATCCTGGAAACTCTCCAGATAGTCAGAAAGTTGATGAATCTCCGGTCCGAACCACTCGAATAGTGTTACTAAAGCCTAGCCCTGGGAGGACACCTGAGCAAAAGGCTGTGGTTTCTCCAACAACATCATCACCACTGAATCTGAAAAGTGGAAATTTCCATCAGGGACCTCAATATGATGATGTACTAGAATCCATTAGAGTGGCACAAGAGATCACACAGCAAATGCATAAAGGCCTGAGGAGCTATCAAAAGGATAAAACTCCATATTCTTCAGTGTTTTCCAATGGCTATTCGGATGACGAGAGTTCATTCAACAAATCATATCATGAGTATGCATCTGCGAATTTCAGCGATTTGGAAGCTATGTCAATGTCACCATTGCCAAGGCTTTCATGGGATTACAATTACATCAATGGCTGTGGCAGCCCTTATTCTACCATGTCCTTGGGCCGTGTGCCGTGCTCTCCTGAGTCATCAGTGTGCAGAGAGGCAAAGAAAAGACTTTCTGAAAGATGGACTATGATGACATCAGATAATAAGGGTCATCAAGAACAAAGGCAAGCAAGGAGAAGCTCTACCTTGGGTGAGATGCTTTCTCTTACCCACAAAAAGAAATCTGCAACATCTGAGGTTGAGAGTATTAATGAAGACCAAGAACCTGGCAAATCTGTTTCTTGCAGTCATTCTTTCAATGCAGAAATAAGGATTGAGGGTTCTCCTAAAAATCTCCCCAGGTCAAATTCTGTGCCTGCATCTTCTACTGTCTATGAAATTGGGAGCACAGTTGAAGTAAATGATCAGAATACTGGCAAAGCAAAAGGCTCCAAGGTGCAGAAAAAGTCAAAGAGTGTGAGATCATCATTTAAAGGGAAAGTTGCCAGTTTCTTGTTCTCAAGGAGTAAGAAATCAACCAAGAAAAAACCAAGTTCATCTCAATCTAAAGATGAATCCCAATCTACTCCTACTGTCACTGAAACATCAGTTCTTCAAGCAAATTCAGCTGGAGTCCTTGAGGATGATGTGTCTCAAAGCATCAATGTGGATGGTTTTGAAGAGTGTTCTCTTGCAGCTCTATGTGAATCACCAGGGAAAAATTCAACAGATTCAGTCTCTAATGGACAAGAAGAAGACATGATTACACTAGAGCCTGGATTGACTGTGCCAAGGCCCATGGTGCCAGAGATTAATTCAAGCGAAAACCCGGATCAGCCAAGTCCAATCTCAGTGTTACAACCTCCATTTGAAGATTATAATAATAATGTATCACATGAGTCCTTGGACTATATGAAGCGTGTTGACCAGGGATCACAGGTGCCACTGAAGTCCAATTTAATTGACAAATCACCACCTATAGAATCAATTGCTAGGACCCTATCATGGGATGATTCTAGTGCAGAAGTGGCAAGCCCCTACCCATTGAAACCCTTAATGGTTTCTTCTTTGGACTCCAAGGTAGAGGATCAAGAGTGGCTTCTCTTGGTCCACAAACTACTATCAGCAGCTGGACTTGATGATCAACAGCAATTCGACTCGTCTTACACTAGATGGCATTCCCTTGAGAGCCCATTGGACCCATCATTGAGGGACACATTATATGCCAATCTAAATGAGCATGAGGGCAGAAGAAGGAAGATGAGATCAAACCATAAACTTGTGTTTGACTATGTCAATGCTGCACTATTGGAACTTGTTGGTTATGGGTCAGAAAAGTGCTTAAAGAGCAGTGGGAGCCACTGCAGAGTCCTAGTCCAAGAGGGTGCATCAGCATCTCCCTTATTGGTGGACCACATTGTGGCCCAAATGAAGGAATTAATAGCAAGTGGGATGAGGTGTGAGTGGGAGGATGGTGGGGACAGCACCAGCCTGGTGGTAGAAAATGTTGTCAGAAAAGAGGTTGTGCAGATAGGGTGGGTTGAGCTTATGGATTTGGAGATTGATATTTTGGGGAAGGAGATTGAAGGGGACTTGATTCAAGAGCTTGTGGAGAATGCAGTGGTTGATTTTACAGGCAGGGCCTAA 2703 0.424 MQMLIDKEMSKQKDSKHNLPNVVAKLMGLETLQRGEPNLSMERSHGRDYSQHVYGPIGLPFRHWQQEDRFMDREMLHEAHPSTEQVSYKDMYEIWQQTQRASHVRGNIPDTDRGRWSEDVDGKRMALIRQKFMEAKRLSTDERLRQSKQFKDALEVLSSNSDLLIRLLDSQNVCDIYSTSPIETKRITLIKPLKMVDNDKSARKEKKNNRVIKKPASVDQAAVWENKNPGNSPDSQKVDESPVRTTRIVLLKPSPGRTPEQKAVVSPTTSSPLNLKSGNFHQGPQYDDVLESIRVAQEITQQMHKGLRSYQKDKTPYSSVFSNGYSDDESSFNKSYHEYASANFSDLEAMSMSPLPRLSWDYNYINGCGSPYSTMSLGRVPCSPESSVCREAKKRLSERWTMMTSDNKGHQEQRQARRSSTLGEMLSLTHKKKSATSEVESINEDQEPGKSVSCSHSFNAEIRIEGSPKNLPRSNSVPASSTVYEIGSTVEVNDQNTGKAKGSKVQKKSKSVRSSFKGKVASFLFSRSKKSTKKKPSSSQSKDESQSTPTVTETSVLQANSAGVLEDDVSQSINVDGFEECSLAALCESPGKNSTDSVSNGQEEDMITLEPGLTVPRPMVPEINSSENPDQPSPISVLQPPFEDYNNNVSHESLDYMKRVDQGSQVPLKSNLIDKSPPIESIARTLSWDDSSAEVASPYPLKPLMVSSLDSKVEDQEWLLLVHKLLSAAGLDDQQQFDSSYTRWHSLESPLDPSLRDTLYANLNEHEGRRRKMRSNHKLVFDYVNAALLELVGYGSEKCLKSSGSHCRVLVQEGASASPLLVDHIVAQMKELIASGMRCEWEDGGDSTSLVVENVVRKEVVQIGWVELMDLEIDILGKEIEGDLIQELVENAVVDFTGRA 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02547 900 MobiDBLite consensus disorder prediction 224 239 - -
Pumo3g02547 900 MobiDBLite consensus disorder prediction 494 513 - -
Pumo3g02547 900 Pfam Protein of unknown function (DUF3741) 129 172 IPR022212 -
Pumo3g02547 900 MobiDBLite consensus disorder prediction 199 280 - -
Pumo3g02547 900 Pfam Domain of unknown function (DUF4378) 722 890 IPR025486 -
Pumo3g02547 900 MobiDBLite consensus disorder prediction 431 445 - -
Pumo3g02547 900 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 899 - -
Pumo3g02547 900 MobiDBLite consensus disorder prediction 405 454 - -
Pumo3g02547 900 MobiDBLite consensus disorder prediction 261 280 - -
Pumo3g02547 900 MobiDBLite consensus disorder prediction 527 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02547 Pumo-Chr3 38498238 38503673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02547 1 897 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 38.168 2.28e-142 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02547 - - gmx:100787955 1496.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02547 3 38498238 38503673 Pumo3g02547 3 38498238 38503673 ECH
Pumo5g02940 5 76974297 76980005 Pumo3g02547 3 38498238 38503673 PCT