Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02533 ATGGAAAAGAAGAATAGAATTTCAGCTATTTTAGCAATATTAATTTTGGCTTTTGCCTCTCCATGTGCTTCAGATATTTACCCTGGATTCATAAAGTGGCATGTGTACATTGTCAATGGGTTAGGCAACAACCAAAACCTATTAGCTCATTGCAAATCAGCAGATGATGATTTGGGTATTCGTAACCTATCTCAAGGGTCCAATTTCACTTGGAGTTTTAGGACGGATTTCACCCACTCAACTCTATTTTGGTGCCATGTGAAAAAGGACAACAATGCTTGTGATGATGGTGCTACATTTAATGTGTTTTGGTACGATGATCGTCTCTTTCAAAAGTGTGATTGGAAGAAGTGCATTTGGAGTGCTAGGGATCAGGGGATTTACCTAAACAATATTGATCAAAACGTTGACGATTTGTATTATCACTGGGATGCTGGAGAGTGA 444 0.3851 MEKKNRISAILAILILAFASPCASDIYPGFIKWHVYIVNGLGNNQNLLAHCKSADDDLGIRNLSQGSNFTWSFRTDFTHSTLFWCHVKKDNNACDDGATFNVFWYDDRLFQKCDWKKCIWSARDQGIYLNNIDQNVDDLYYHWDAGE 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02533 147 PANTHER - 31 133 IPR010264 -
Pumo3g02533 147 Pfam Plant self-incompatibility protein S1 34 143 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02533 Pumo-Chr3 38272170 38272613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02533 35 145 Carbohydrate Esterase AT3G16970 30.769 2.72e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02533 - - gmx:102661112 276.944