Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02517 ATGGCTGCCACAGCCAATCCTATAGTTGGTTCCCATGTTTGGGTGGAGGATTCTCAAGTAGCTTGGATAGATGGTGAGGTCTTGGAGGTTAAGGGAGAAGAAATCAAAGTCCTTTGCACTTCTGGGAAGACGGTTGTTGTTAAAGCTTCTAGTGTTTATCATAAAGATACCGAAGCCCCACCATGTGGAGTGGATGATATGACAAAACTTGCTTATCTACATGAACCTGGTGTCCTGGATAATCTGAGATCAAGATATGATATCAATGAAATTTATACTTACACCGGGAATATATTGATTGCTGTGAATCCTTTCATAAGGCTTCCTCATTTATACGATAGCCATATGATGGCACAATATAAAGGAGCAGGTTTTGGTGAGCTAAGTCCACATCCTTTTGCTGTTGCAGATGCAGCATATAGACTTATGATTAATGAGGGAATCAGCCAGTCGATATTGGTTAGTGGTGAAAGTGGGGCTGGGAAAACAGAAAGCACCAAGTTACTCATGCGCTATCTTGCTTACATGGGAGGGAGAGCTAATAGTGCAGCTGAAGGTAGAACTGTTGAGCAGAAAGTCCTGGAGTCCAATCCTGTTTTAGAAGCCTTTGGCAATGCAAAGACTGTTAGAAACAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATTCAATTTGACCAGAGGGGAAGGATTTCTGGGGCTGCTATCAGAACTTATCTGCTGGAAAGATCACGTGTTTGCCAGTTGTCAGATCCAGAGAGGAACTATCACTGTTTCTATATGCTCTGTGCTGCACCTCCGGAGGATATTCAGAAGTACAAATTAGGAAATCCTAGAACATTTCATTATCTGAATCAAACAAATTGCTTTGAGTTGGAAGGGGTTGACGAGTTAAAAGAATATCGGGATACGAGGAGAGCAATGGACGTTGTTGGAATAAGTTCTGAGGAGCAGGAAGCAATATTTCGAGTGGTTGCTGCAATTTTGCATCTTGGCAACATTGAATTTACAAAAGGGAAAGAAATTGACTCATCTGCGCCCAAAGATGAAAAATCTTGGTTTCATCTACGAACTGCTGCCGAACTTTTCATGTGTGATGCAAAGGCACTTGAAGATTCTCTTTGCAAGCGTGTAATTGTTACTCGTGATGAAACTATAACAAAATGGCTGGATCCAGAAGCTGCTGCACTCAGCCGAGATGCTTTGGCTAAGATTGTGTACACGAGGTTGTTTGATTGGCTGGTGGATAAAATTAATAATTCAATCGGTCAAGATCCTGACTCAAAGTCCTTAATTGGTGTGCTGGATATTTATGGTTTTGAGAGTTTCAAGACTAACAGTTTTGAGCAATTTTGTATCAATTTGACCAATGAAAAGCTTCAGCAACATTTTAATCAGCATGTTTTCAAAATGGAGCAAGAAGAATACAAAAAAGAGGAGATTGATTGGAGTTACATTGAGTTTGTTGATAATAAAGATGTTCTGGATCTCATTGAAAAGAAACCTGGTGGCATTATTGCTCTTCTTGATGAAGCTTGTTCCACCGAACCACACTACATTCGCTGTGTTAAACCCAATAATCTTCTTAAGCCAGGAATTTTTGAGAATAAAAATGTTTTGCAGCAACTGCGATGTGGGGCTGCAAGAGAAACTGGAGCTCTCCAAGCTGCCAAAAATAAGCTTGAAAAGCAAGTTGAAGACCTTTCATTGAGGTTGCAGCTGGAAAAACGCCTGAGGAAAATTGATGAAACAGAAAAAAGATATGAAGAGGCAAACAAAATTAGTGAAGAAAGGTTGAAGCAGGCCTTGGATGCTGAATCAAAAATAATCCAGTTGAAGACTGCTATGCAAAGGCTCGAAGAGAAATTCTCAGATATGGAAACCGAAAACCAGGTTCTTCGGCAACAGTCTCTGCTAAACCCATCTGCAAAAACGATGTCAGAACACCTTTCCACCCACATATCTGAGAAGTTGGAAAATGGTCACCATGTGGTGGAAGATCAGAAAACTGCTGCACCAAGAACATCTAAGGGAGTGCTACGATCTGGCCGATCCTTTGGTAAAGATTCTCCCATGGGTCACTGGCAGAGTATTATAGAATCCCTGAACACTCTCCTCTGTACTCTGAAAGAGAACTTCGTACCTCCAGTCCTTATTCAAAAGATCTTCACTCAAACATTCTCATATATTAATGTTCAACTCTTCAATAGTCTTCTTCTGCGTCGAGATTGTTGCACATTCAGCAACGGGGAATATGTGAAAGCTGGTTTAGCAGAATTGGAGTTGTGGTGCTGCCAAGCAAAGGAGGAGTATGCAGGTTCATCTTGGGATGAGCTTAAGCACATAAGACAAGCTGTTGGATTCTTGGTTATTCATCAGAAGTATAGGATTTCCTATGATGAAATCATTAATGATTTATGCCCAATCATGAGTGTCCAACAACTGTACAGAATATGTACACTTTACTGGGATGCTAACTACAATACTCGAAGTGTATCTCCAGATGTCCTTTCAAGCATGAGAGTACTTATGGCTGAGGACTCTAATAATGCTCAGAGTGATTCTTTCTTGTTGGATGACAGTTCCAGTGCAACATGGCCCAACACTGCTCGCTAG 2616 0.409 MAATANPIVGSHVWVEDSQVAWIDGEVLEVKGEEIKVLCTSGKTVVVKASSVYHKDTEAPPCGVDDMTKLAYLHEPGVLDNLRSRYDINEIYTYTGNILIAVNPFIRLPHLYDSHMMAQYKGAGFGELSPHPFAVADAAYRLMINEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRANSAAEGRTVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQRGRISGAAIRTYLLERSRVCQLSDPERNYHCFYMLCAAPPEDIQKYKLGNPRTFHYLNQTNCFELEGVDELKEYRDTRRAMDVVGISSEEQEAIFRVVAAILHLGNIEFTKGKEIDSSAPKDEKSWFHLRTAAELFMCDAKALEDSLCKRVIVTRDETITKWLDPEAAALSRDALAKIVYTRLFDWLVDKINNSIGQDPDSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNKDVLDLIEKKPGGIIALLDEACSTEPHYIRCVKPNNLLKPGIFENKNVLQQLRCGAARETGALQAAKNKLEKQVEDLSLRLQLEKRLRKIDETEKRYEEANKISEERLKQALDAESKIIQLKTAMQRLEEKFSDMETENQVLRQQSLLNPSAKTMSEHLSTHISEKLENGHHVVEDQKTAAPRTSKGVLRSGRSFGKDSPMGHWQSIIESLNTLLCTLKENFVPPVLIQKIFTQTFSYINVQLFNSLLLRRDCCTFSNGEYVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEIINDLCPIMSVQQLYRICTLYWDANYNTRSVSPDVLSSMRVLMAEDSNNAQSDSFLLDDSSSATWPNTAR 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02517 871 Pfam DIL domain 722 825 IPR002710 -
Pumo3g02517 871 Gene3D Kinesin motor domain 65 440 IPR036961 -
Pumo3g02517 871 Pfam Myosin head (motor domain) 64 514 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo3g02517 871 PRINTS Myosin heavy chain signature 431 459 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo3g02517 871 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo3g02517 871 PRINTS Myosin heavy chain signature 198 225 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo3g02517 871 PRINTS Myosin heavy chain signature 484 512 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo3g02517 871 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo3g02517 871 Gene3D - 441 514 - -
Pumo3g02517 871 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pumo3g02517 871 FunFam Myosin 2 314 427 - -
Pumo3g02517 871 PANTHER MYOSIN 57 513 - -
Pumo3g02517 871 Gene3D Kinesin motor domain 516 549 IPR036961 -
Pumo3g02517 871 Coils Coil 551 636 - -
Pumo3g02517 871 Gene3D - 254 312 - -
Pumo3g02517 871 SMART MYSc_2a 57 590 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo3g02517 871 FunFam Myosin heavy chain 254 309 - -
Pumo3g02517 871 ProSiteProfiles Dilute domain profile. 607 846 IPR002710 -
Pumo3g02517 871 ProSiteProfiles Myosin motor domain profile. 62 517 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo3g02517 871 Pfam Myosin N-terminal SH3-like domain 9 52 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pumo3g02517 871 Gene3D Myosin VI head, motor domain, U50 subdomain 314 424 - -
Pumo3g02517 871 SMART DIL_2 721 828 IPR002710 -
Pumo3g02517 871 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 558 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02517 Pumo-Chr3 38030053 38047860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02517 672 790 Myosins gene family AT1G04160 76.667 8.13e-52 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02517 K10357 - gmx:100786893 1021.92