Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02501 ATGGGTGTCGCACGTTTTTTCCATGATGTCCTAGGATTGCCCGTAGTTGGAACTTGCGACAATCTGCGTGAACCTGACTTTTGTTCTTTTGTTTCTCTTTGTTGCCTCGGTGAGGCGTGTTCTTGTGTACGAGGGTGGGTTTCGATTGGTAAGAATGGAAACAGCGGCAATGCTAGCCCAATTTGTAGTGTCATTGATGAAGAAACGCGTGGTGTTAGAATCGGTGTGGGGTTCAAGTTGTCAGTGTTGTCTTGTTTCTATGTTTTGTTTGTACATGTTTTGGCGTTGGGGTTTGAAGGGTGTGCTTTGATTTGGGGTGAGGCTAATGGGGAGGCTGACGTGGATTTGTCACTTGTTTCTGTGCCTGCTGCACAGGGTTTGGCTTGGTTTGTGTTGAGCTTCTCGGCCTTGTATTGCAAGTTCAAGGTGTCAGAGAGGTTCCCATTTTTGTTGAGAGTTTGGTGGTTTTTGTCCTTTGTTATTTGCTTGTGTACTTTGTACGTTGATGGGAGAGGATTTTGGGTGGAGGGTTCTAAACATCTATGTTCCCGTGCTGTTGCAAATGTTGCTGTCACTCCAGCTCTTGCATTTTTGTGTGTGGTTGCAATTAGGGGTGGTACTGGTATAAGAGTTTGTGGGAACTCTGATCTTCAAGAGCCATTGCTTGTTGAGGAGGAACCGGGGTGTCTCAAGGTTACTCCTTATAGAGATGCTGGACTTTTTAGTTTGGCTACTCTTTCTTGGCTGAATTCACTTCTTTCCATTGGTGCAAAGAGACCGCTTGAGCTTAAGGACATTCCACTTGTTGCACCAAGAGATAGAGCCAAGACTAGTTATAAGGTTTTGAATTCTAATTGGGAGAGATTAAAGGCTGAAAATGAAAATCCCTCTAAGCAGCCTTCGTTGGCTTGGGCGATTCTCAAGTCATTCTGGAAGGAAGCAGCTCTGAATGCCATCTTTGCTGGTATGAATACTTTGGTGTCATATGTAGGTCCATACATGATAAGTTACTTTGTGGATTACTTGGGTGGCAAGGAGACTTTCCCCCATGAGGGATATATCCTTGCTGGTATTTTATTTGTGGCAAAGCTTGTGGAGACTGTGACAACTAGGCAGTGGTATCTGGGAGTGGACATCTTGGGTATGCATGTTAGGTCTGCTCTAACTGCAATGGTATATAGGAAGGGACTCAGACTCTCAAGCTCAGCCAAGCAGAGTCACACAAGTGGGGAGATTGTCAACTACATGGCTGTTGATGTTCAGAGGGTTGGGGACTACTCTTGGTACCTTCATGACATGTGGATGCTTCCTATGCAGATTGTTCTTGCCCTTCTAATTCTGTATAAGAATGTTGGAATTGCTTCTGTTGCAACATTGATTGCTACAATCATTTCCATTGTTGTCACTATTCCTGTGGCTAGGATACAAGAAGATTATCAGGACAAATTGATGGCAGCTAAGGATGAAAGGATGAGAAAGACATCAGAGTGTCTTAGGAATATGAGGATTCTTAAGCTGCAAGCTTGGGAGGACCGATATCGATTGAAGTTGGAGGAAATGCGTGGAGTAGAGTTCAAGTGGCTAAGGAAAGCACTCTATTCTCAAGCTTTCATAACTTTCATGTTCTGGAGCTCCCCTATATTTGTTTCAGCCTGTTACTTTTGCTACTTCCATATTGTTGGGAGGACAGTTGACAGCAGGTGGTGTTCTCTCTGCTCTAGCTACTTTCAGGATTCTCCAAGAACCTCTGAGGAATTTTCCTGA 1764 0.4422 MGVARFFHDVLGLPVVGTCDNLREPDFCSFVSLCCLGEACSCVRGWVSIGKNGNSGNASPICSVIDEETRGVRIGVGFKLSVLSCFYVLFVHVLALGFEGCALIWGEANGEADVDLSLVSVPAAQGLAWFVLSFSALYCKFKVSERFPFLLRVWWFLSFVICLCTLYVDGRGFWVEGSKHLCSRAVANVAVTPALAFLCVVAIRGGTGIRVCGNSDLQEPLLVEEEPGCLKVTPYRDAGLFSLATLSWLNSLLSIGAKRPLELKDIPLVAPRDRAKTSYKVLNSNWERLKAENENPSKQPSLAWAILKSFWKEAALNAIFAGMNTLVSYVGPYMISYFVDYLGGKETFPHEGYILAGILFVAKLVETVTTRQWYLGVDILGMHVRSALTAMVYRKGLRLSSSAKQSHTSGEIVNYMAVDVQRVGDYSWYLHDMWMLPMQIVLALLILYKNVGIASVATLIATIISIVVTIPVARIQEDYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRLKLEEMRGVEFKWLRKALYSQAFITFMFWSSPIFVSACYFCYFHIVGRTVDSRWCSLCSSYFQDSPRTSEEFS 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02501 587 Pfam ABC transporter transmembrane region 318 559 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo3g02501 587 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 235 559 - -
Pumo3g02501 587 SUPERFAMILY ABC transporter transmembrane region 303 557 IPR036640 GO:0005524|GO:0016020
Pumo3g02501 587 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 315 552 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo3g02501 587 FunFam ABC transporter C family member 10 298 568 - -
Pumo3g02501 587 CDD ABC_6TM_ABCC_D1 316 566 IPR044746 GO:0140359
Pumo3g02501 587 Gene3D ABC transporter type 1, transmembrane domain 282 576 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02501 Pumo-Chr3 37826659 37828422 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02501 - - gmx:100781010 1003.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02915 5 76449624 76454856 Pumo3g02501 3 37826659 37828422 PCT