Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02500 ATGGCTCAGACAAAAGTTTCTCTTGATCGCATATCTGCTTTCCTGCAGGATGAAGAATTGCAGGAAGATGCGACTATTGTCTTGCCACGTGGCATTTCTAACACGGCCATAGAAATTATGGATGGTGTCTTCTGTTGGGACTCTTCTTTGCCTAGGCCTACTCTATCAGAAATACATATGAAAGTGGAAAGAGGGATGACTGTGGCTGTTTGTGGCATGGTTGGTTCTGGGAAATCAAGTTTTCTTTCTTGCATCCTTGGAGAGATTCCCAAGCTGTCTGGTGAAGTAAAAGTGTGTGGTTCTGTTGCATATGTTTCCCAATCTGCTTGGATACAGTCAGGAAATATAGAAGAAAATATCCTGTTTGGCACCCCAATGGACAAAGCAAAGTATAAGAATGTTCTTCATGCTTGTTCACTGAAAAAGGACCTAGAACTTTTCTCATATGGAGACCAAACAATTATTGGTGACAGAGGTATAAATTTGAGTGGTGGCCAGAAGCAGCGGGTTCAGCTTGCAAGAGCACTCTACCAAGATGCTGATATTTACCTCCTTGATGATCCCTTCAGTGCAGTTGATGCCCACACTGGATCAGAATTATTTAGGGAGTATGTATTGACAGCACTAGCAGATAAAACAGTAATTTTCGTGACCCATCAAGTTGAATTTCTTCCTGCTGTTGATATGATACTGGTTCTTAAAGAAGGGCACATCATACAGGCAGGAAAATATGATGATCTTTTACAAGCAGGAACAGATTTTAAAACTCTAGTTTCAGCTCACCATGAAGCAATAGAGGCTTTGGATATTCTTAATCACTCAGAAGATTCAGATGAAAATGTACCCTTGGATGAAACTGTTATGACCAGTAAGACATCCATTTCTTCTGCAAATGATATTGAGAGTTTGGCAAAGGAAGTTCAAGAGGGATCTTCAGATCAGAAAGCAATTAAGGAGAAGAAGAAAACAAAACGCTCAAGAAAAAAACAGCTTGTTCAGGAAGAGGAGAGGGTTAGAGGTAGAGTCAACATGAAGGTGTACTTGTCATACATGGCTGCAGCATATAAAGGTTTATTGATTCCACTCATAATCATTGCACAAACATTATTTCAGTTCCTCCAGATTGCCAGTAATTGGTGGATGGCTTGGGCAAATCCTCAAACTGAGGGAGACCAGCCCAAAGTAACTCCCACAGTTCTTCTTCTTGTTTACATGGCCCTTGCTTTTGGCAGCTCATGGTTCATATTCGTAAGGGCTGTTCTCGTGGCTACATTTGGTCTAGCAGCTGCACAGAAACTATTTTTCAACATGCTTAGAAGCATTTTCCATGCACCAATGTCTTTCTTTGACTCTACACCAGCTGGAAGGATCCTGAATCGTGTTTCAATTGATCAAAGTGTTGTGGATCTTGATATTCCTTTTAGACTTGGAGGGTTTGCTTCATCAACAATACAGCTTATTGGCATTGTTGCTGTAATGACAGATGTTACATGGCAAGTTTTGCTCCTAGTAGTCCCCATGGCTATTGTTTGTTTGTGGATGCAGAAATACTACATGGCTTCCTCGAGGGAACTGGTACGTATTGTGAGCATCCAGAAATCTCCAATTATACATCTTTTTGGTGAATCAATTGCTGGAGCAGCCACCATTAGGGGTTTTGGACAAGAAAAAAGGTTCATGAAGAGGAACCTCTATCTACTGGATTGTTTTGCACGACCATTTTTCTGTAGTCTTGCAGCTATTGAGTGGCTCTGCCTGCGCATGGAATTACTTTCAACCTTTGTATTTGCTTTCTGCCTGGTATTACTTGTTAGCCTTCCCCATGGAAGTATTGATCCCAGCATGGCTGGACTTGCTGTAACATATGGCTTGAATTTAAATGCACGTCTATCACGATGGATACTTAGCTTTTGCAAACTTGAAAATAAAATTATATCCATTGAAAGAATTTATCAGTACAGCCAAATTCCTAGTGAAGCACCAGCAATTGTTGAAGATTCTCGCCCTCCATCCTCATGGCCTGAGAATGGAACAATCCAATTAATTGATCTGAAGGTACGTTACAAGGGAAATCCTTCCTGTGGTGCTTCACGGAGTATCCTGCACATTTCCTGGTGGGAAGAAGATCGGAATAGTTGGTCGCACTGGCAGTGGCAAATCTACCTTGATTCAAGCATTATTTCGATTGGTTGA 2193 0.4122 MAQTKVSLDRISAFLQDEELQEDATIVLPRGISNTAIEIMDGVFCWDSSLPRPTLSEIHMKVERGMTVAVCGMVGSGKSSFLSCILGEIPKLSGEVKVCGSVAYVSQSAWIQSGNIEENILFGTPMDKAKYKNVLHACSLKKDLELFSYGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFREYVLTALADKTVIFVTHQVEFLPAVDMILVLKEGHIIQAGKYDDLLQAGTDFKTLVSAHHEAIEALDILNHSEDSDENVPLDETVMTSKTSISSANDIESLAKEVQEGSSDQKAIKEKKKTKRSRKKQLVQEEERVRGRVNMKVYLSYMAAAYKGLLIPLIIIAQTLFQFLQIASNWWMAWANPQTEGDQPKVTPTVLLLVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFFNMLRSIFHAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASSTIQLIGIVAVMTDVTWQVLLLVVPMAIVCLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGAATIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCLVLLVSLPHGSIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPSEAPAIVEDSRPPSSWPENGTIQLIDLKVRYKGNPSCGASRSILHISWWEEDRNSWSHWQWQIYLDSSIISIG 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02500 730 Gene3D ABC transporter type 1, transmembrane domain 321 660 IPR036640 GO:0005524|GO:0016020
Pumo3g02500 730 MobiDBLite consensus disorder prediction 305 330 - -
Pumo3g02500 730 CDD ABCC_MRP_domain1 37 236 - -
Pumo3g02500 730 SUPERFAMILY ABC transporter transmembrane region 359 659 IPR036640 GO:0005524|GO:0016020
Pumo3g02500 730 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 37 260 IPR003439 GO:0005524
Pumo3g02500 730 Gene3D - 5 279 IPR027417 -
Pumo3g02500 730 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 691 - -
Pumo3g02500 730 Pfam ABC transporter transmembrane region 362 606 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo3g02500 730 SMART AAA_5 64 245 IPR003593 GO:0016887
Pumo3g02500 730 ProSitePatterns ABC transporters family signature. 162 176 IPR017871 GO:0005524|GO:0016887
Pumo3g02500 730 CDD ABC_6TM_ABCC_D2 360 654 IPR044726 GO:0140359
Pumo3g02500 730 Pfam ABC transporter 55 189 IPR003439 GO:0005524
Pumo3g02500 730 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 259 IPR027417 -
Pumo3g02500 730 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 362 632 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo3g02500 730 Coils Coil 317 337 - -
Pumo3g02500 730 FunFam ABC transporter C family member 5 22 269 - -
Pumo3g02500 730 FunFam ABC transporter C family member 5 323 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02500 Pumo-Chr3 37822294 37826645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02500 37 253 Calmodulin-binding Proteins AT2G36910 28.571 6.83e-22 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02500 - - gmx:100781010 1311.21