Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02496 ATGCAGCTGAAAACTCAGTTTTTCTTCTACTTCTGTTGCATTTGCTGTTTCTCTTATGGCTTTGCAGCTGCAGCAAATGATGAAGCATCTTCCTTACTTTCTATAAAAAAAGGCCTCATTGATCCACTGAATAGCCTGCATGATTGGAAATTGGTGGACAAAGCAGAAGGAAAGGATGCAGCTCATTGTAACTGGACTGGTGTCCAGTGCAACTCAGGTGGAGCCGTAGAGAAGCTCGATCTCTCCCGCATGAATCTGAGTGGCATTGTATCCAATGAGATACAAAGGCTAAAGAGTCTCACTTCTCTCAACTTGTGTTGCAATGAATTTTCCTCAACATTGTCATCCATAGCCAATCTCACCACACTGAAGAGTCTTGATGTGAGCCAGAATTTCTTCACTGGTGACTTTCCATTAGGCCTTGGAAAGGCACCAGGACTAATGACCTTAAATGCATCCAGCAACAATTTCTCTGGCTTTCTTCCTGAGGATCTTGGAAATGTCTCTTCCTTGGAGACTTTGGATCTCAGAGGCAGCTTCTTTGAAGGGTCAGTTCCAAAATCCTTCAGTAAATTGCACAAGTTGAAGTTCCTTGGTTTATCTGGGAATAATCTCACTGGGGAAATCCCAGGAGAGCTGGGGCAGCTTTCATCACTGGAATGCATGATCATTGGATACAATGAATTTGAAGGAGGGATACCAGCAGAGTTTGGAAATCTCACCAAGCTAAAGTATCTTGATATAGCAGAAGGCAATCTTGGTGGTGAAATTCCAGCTGAGTTGGGAAAGCTCAAACTGTTGAATACAGTTTTCTTGTACAAAAACAAATTTGAAGGCAAGATTCCACCAGCAATTGGCAACATGACTTCATTGGTGCAGCTGGATCTCTCAGACAACATGTTATCAGGAAATATTCCACCTGAAATAAGTCAGCTGAAGAATTTACAGCTTCTGAACTTCATGCGGAACCGGCTATCTGGTCCTGTGCCTTCTGGCCTTGGGGATTTGCCTCAACTAGAGGTGCTGGAGCTATGGAACAATTCCTTGTCAGGGCCATTGCCTAGAAACCTTGGCAAGAATTCACCATTGCAGTGGTTGGATGTGTCATCCAATTTACTCTCTGGTGAGATTCCAGAAACTCTTTGCACCAAGGGCTATCTCACCAAGCTCATACTTTTCAATAATGCCTTCTTGGGTCCAATTCCAGCAAGCCTATCAACATGTCCTTCACTTGTTCGTGTTCGAATCCAGAACAATTTCCTTTCTGGGACAATTCCTGTGGGTCTTGGTAAGCTTGGGAAGCTTCAGAGGTTAGAATTGGCTAACAATAGTCTCACTGGTGGAATTCCTGATGACATTGGTTCTTCTTCATCCCTTTCTTTCATTGATTTTTCCAGAAACAACCTCCACTCTTCTCTTCCTTCAACCATTATTTTCATTCCAAATCTTCAAACTTTAATTGTCTCCAACAACAACTTGAGAGGTGAAATCCCAGACCAATTCCAGGATTGTCCCTCACTTGGTGTCCTTGATCTCTCATCAAATCGATTCTCTGGAAGCATTCCAGCTAGCCTTGCATCATGTCAGAAATTGGTAAACTTGAACCTACAGAATAACCAATTGACTGGTGGAATCCCAAAAGCATTAGCAAGCATGCCTACATTGGCCATTCTTGATCTTGCCAACAACACTCTGAGTGGTCATATACCTGAAAACTTTGGTATGTCTCCAGCTCTAGAAACATTCAATGTCTCACACAACAAGCTAGAAGGTCCTGTCCCAGAAAATGGCGTGCTAAGAACAATAAACCCAAATGATCTTGCGGGAAATGCTGGCTTATGTGGTGGTGTTCTCCCTCCATGTGGCCAAACCTCAGCATATCCATTAAGGCATAGGAGCTCACGTGCAAAGCACATTCTTGTAGGCTGGATCGTTGGAATATCAGCAATACTAGCCATTGGGGTTGCAACTTTGGTAGCAAGATCTTTATACGTGAGGTGGTACACTGATGGATTGTGCTTCCGAGAAAGATTTTATAAGGGTAGGAAGGGGTGGCCTTGGAGATTGATGGCCTTTCAGAGGCTTGATTTTACAAGTAGTGACATTTTATCTTGCATCAAAGATACAAATATGATTGGCATGGGAGCAACTGGGGTTGTTTACAAGGCTGAGATACCACAATCAAGTGCAATTGTGGCTGTCAAAAAGTTGTGGAGATCAGGATCTGATATTGAAGTAGGAAACAGTGATGACCTTGTTGGAGAGGTGAATCTTTTAGGGAGGCTAAGGCATAGGAACATTGTTAGACTACTAGGCTTTCTTTACAATGACGCTGATGTGATGATAGTTTATGAATTTATGCACAATGGAAACCTTGGAGATGCCCTGCATGGTAAACAAGCAGGAAGATTGCTTGTAGACTGGGTTTCCCGATACAACATAGCTCTAGGAATTGCACAAGGACTTGCTTATCTTCATCATGACTGCCATCCACCTGTTATCCATCGAGACATCAAGTCAAATAATATACTGCTTGATGCAAATCTTGAGGCAAGGATAGCGGATTTCGGATTGGCCAAGATGATGCTCCGGAAGAATGAAACAGTCTCCATGATTGCTGGATCCTATGGATACATTGCCCCTGAATATGGATACTCCTTGAAAGTGGATGAAAAGATTGACATTTACAGTTATGGAGTGGTTCTGTTGGAGCTTCTCACCGGAAAGCGGCCTTTAGATCCGGAGTTTGGAGAATCTATAGACTTAGTAGGGTGGATTAGAAGGAAGATAGACAACAAATCTCCAGAAGAAGCATTAGACCCCAGTGTAGGAAACTGCAAGCATGTTCAAGAAGAGATGCTTTTAGTTCTCAGAATAGCACTTCTTTGCACTGCCAAGTTCCCCAAGGACAGACCCTCTATGAGGGATGTTATAATGATGCTTGGAGAGGCAAAGCCTCGGAGAAAGAGTGGTAGGAGCAGTGAAACTTTTTCAGCTAACAAGGAGATGCCAGCTATTAGCTCATCACCAGTTAATGGCCTTCTGTAG 3048 0.4314 MQLKTQFFFYFCCICCFSYGFAAAANDEASSLLSIKKGLIDPLNSLHDWKLVDKAEGKDAAHCNWTGVQCNSGGAVEKLDLSRMNLSGIVSNEIQRLKSLTSLNLCCNEFSSTLSSIANLTTLKSLDVSQNFFTGDFPLGLGKAPGLMTLNASSNNFSGFLPEDLGNVSSLETLDLRGSFFEGSVPKSFSKLHKLKFLGLSGNNLTGEIPGELGQLSSLECMIIGYNEFEGGIPAEFGNLTKLKYLDIAEGNLGGEIPAELGKLKLLNTVFLYKNKFEGKIPPAIGNMTSLVQLDLSDNMLSGNIPPEISQLKNLQLLNFMRNRLSGPVPSGLGDLPQLEVLELWNNSLSGPLPRNLGKNSPLQWLDVSSNLLSGEIPETLCTKGYLTKLILFNNAFLGPIPASLSTCPSLVRVRIQNNFLSGTIPVGLGKLGKLQRLELANNSLTGGIPDDIGSSSSLSFIDFSRNNLHSSLPSTIIFIPNLQTLIVSNNNLRGEIPDQFQDCPSLGVLDLSSNRFSGSIPASLASCQKLVNLNLQNNQLTGGIPKALASMPTLAILDLANNTLSGHIPENFGMSPALETFNVSHNKLEGPVPENGVLRTINPNDLAGNAGLCGGVLPPCGQTSAYPLRHRSSRAKHILVGWIVGISAILAIGVATLVARSLYVRWYTDGLCFRERFYKGRKGWPWRLMAFQRLDFTSSDILSCIKDTNMIGMGATGVVYKAEIPQSSAIVAVKKLWRSGSDIEVGNSDDLVGEVNLLGRLRHRNIVRLLGFLYNDADVMIVYEFMHNGNLGDALHGKQAGRLLVDWVSRYNIALGIAQGLAYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLAKMMLRKNETVSMIAGSYGYIAPEYGYSLKVDEKIDIYSYGVVLLELLTGKRPLDPEFGESIDLVGWIRRKIDNKSPEEALDPSVGNCKHVQEEMLLVLRIALLCTAKFPKDRPSMRDVIMMLGEAKPRRKSGRSSETFSANKEMPAISSSPVNGLL 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02496 1015 Pfam Leucine rich repeat 145 205 IPR001611 GO:0005515
Pumo3g02496 1015 Pfam Leucine rich repeat 481 541 IPR001611 GO:0005515
Pumo3g02496 1015 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 25 179 - -
Pumo3g02496 1015 FunFam MDIS1-interacting receptor like kinase 1 791 1000 - -
Pumo3g02496 1015 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 180 280 - -
Pumo3g02496 1015 ProSitePatterns Serine/Threonine protein kinases active-site signature. 833 845 IPR008271 GO:0004672|GO:0006468
Pumo3g02496 1015 FunFam Leucine-rich repeat receptor protein kinase EMS1 281 364 - -
Pumo3g02496 1015 Gene3D Ribonuclease Inhibitor 179 275 IPR032675 -
Pumo3g02496 1015 Gene3D Ribonuclease Inhibitor 24 178 IPR032675 -
Pumo3g02496 1015 SUPERFAMILY L domain-like 61 350 - -
Pumo3g02496 1015 SMART LRR_typ_2 432 456 IPR003591 -
Pumo3g02496 1015 SMART LRR_typ_2 552 575 IPR003591 -
Pumo3g02496 1015 SMART LRR_typ_2 288 312 IPR003591 -
Pumo3g02496 1015 SMART LRR_typ_2 336 360 IPR003591 -
Pumo3g02496 1015 SMART LRR_typ_2 192 216 IPR003591 -
Pumo3g02496 1015 SMART LRR_typ_2 480 503 IPR003591 -
Pumo3g02496 1015 ProSitePatterns Protein kinases ATP-binding region signature. 712 736 IPR017441 GO:0005524
Pumo3g02496 1015 Pfam Leucine rich repeat N-terminal domain 25 71 IPR013210 -
Pumo3g02496 1015 Gene3D Ribonuclease Inhibitor 384 625 IPR032675 -
Pumo3g02496 1015 Gene3D Transferase(Phosphotransferase) domain 1 791 1004 - -
Pumo3g02496 1015 Gene3D Ribonuclease Inhibitor 276 383 IPR032675 -
Pumo3g02496 1015 MobiDBLite consensus disorder prediction 996 1015 - -
Pumo3g02496 1015 Gene3D Phosphorylase Kinase; domain 1 706 790 - -
Pumo3g02496 1015 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 365 625 - -
Pumo3g02496 1015 ProSiteProfiles Protein kinase domain profile. 706 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g02496 1015 SUPERFAMILY Protein kinase-like (PK-like) 701 981 IPR011009 -
Pumo3g02496 1015 PANTHER UNNAMED PRODUCT 180 915 - -
Pumo3g02496 1015 MobiDBLite consensus disorder prediction 985 1015 - -
Pumo3g02496 1015 FunFam MDIS1-interacting receptor like kinase 1 706 790 - -
Pumo3g02496 1015 SUPERFAMILY RNI-like 281 591 - -
Pumo3g02496 1015 SMART serkin_6 706 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g02496 1015 Pfam Protein kinase domain 708 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02496 Pumo-Chr3 37787754 37791406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02496 7 1015 Receptor kinase-like Gene Family AT1G08590 60.214 0.0 1168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pumo3g02496 Pkinase 6.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02496 - - gmx:100788430 1891.32