Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02491 ATGGCGCCGAGTCAAAAAGAAAGAGCACTTGCGGCCTGTCGTGCAATGTCAAGTCTTGGAATTGATGATTCGAAAGTGAAATCAGTGTTAAAGAAACTCCTCAAAGTGTATGATAAAAATTGGGAACCTATTGAGGCAGAGAACTATAGAGTTCTAGCAGATGCTATATTTGAGGATGACGATAATATGGTGCCCGAACAGAAAAAGAGAAGTCAGACAGCCAATGTACATAACCCTCGTCATTCTTTGTCTTCTTCCATTACAAACCACCAGGAAACAGAGGCAGAGTGTGAAGAGGCTCAGATGCATATTGAAACAGCCCGACCTTTGAAAAGGTTGCGATTACAAGGCCAAGAGAGTCAGGCTTTGCATCCTCTGACTAACAGTGCCCCCAGCCCTCCATCAAAAAAAGCTAAATTAGAAGATGCTGGGAAGAAGCCTCAAAACAAGCCAGTGTCATCTGATGGGAATCCAAGGATTGAAGCACGTCCACTTCCACTCCAAGATGGCATTATTGATAAGGGAAAGCAACCTGCATCACCCCAAGTTTCTCACAGAGGAAGAAGACTTACATCTGAAAGAGCGTCCCCATCCATACCATCTAAAGAACCAACAGTTGAACCAGGGAAGTTTCTGTTGCCAAACAAACAAATGCCTCGTATTCACACACTGATCATACCCAAGGATGAGCCTATTGATGAATTGCCTGATTACGAGATGCCCATTACAGTGATTCCTCCTGAAATATCAAGTGCAAGGGACTCGTCAATGAAGAATGGCGTAGCTGGAAAGCGTAGTGGTTGTGTTACAGTGACATCATCACAAAGCAGAGATGGAGTTAGAGATGAAGATGTTATTCCTACCTCAAATGAACAAGCGACTTGTAATGTAGAGATAGCCTCATCAACTCTTGGAGAGGTAAAGCTTTCTTTGAGCTGCAGCTCAGCTCTTCGGGGATCAGATTTTCATATTCCTAGTCGAGATCAACTTATAGAAATGATGGAGGATAAATGTCTGCATTCATATAAAATCACTGACCCGAATTTCTCTGTCAAAAAATTGTTGAGAGATATATGTGATTGCATGTTGGAATTCAGAAATGATTCAAATGATGACTCACAAGAAGGTTCTATGATAAATTCCAGTGTTGATGTGTTGAAGGAACCGCAGGCACCTGGCACACTGAGTGTGGTAGGAAATAAAGATTTGGACACATCTTCTAGCTTTTCAAATGGATCCATCAATGTTAAGTCTTCTGATGCCTTGGTTTCTCCCCGAAGCCTTCTTCATCTAGCCCACCTGAATGGTCTGAATGATGCTGTACCAGTTTCCAAGATGGACAGAACAAATGATTTTTCGCAAAGTAATGTCAGAAAGGAGCTGGAAGATCCTATGTCTCCAAATTCGCATAGTTTAGTGGTTGTTCCACAGCATCAGCTTACAGCTGAGGATATAAGGTCTTTTCATGATGCTAATGACCTTACAAAAGGAGAAGAAAATGTTAAAATTCCATGGGTGAACGAAACTAATAATGATTTCGCACCATCTTTTAATTACATACCCCAAAACCTTGTGTTCCAAGATGCTTATGTTAACATTTCTCTATCACGTATTGGCGGTGAGGACTGTTGTTCAACTTGTATGGGCAATTGTGTCTTGTCTACACCCTGTGCTTGTGCAAATAAAACTGGGGGTGAATTTGCATACAATGCTAAAGGCCTACTGAAGGAAGCATTCTTGGAAGAGTGTGTTGCCATCAGTCGCAACCCTCACCAACATTTCTTCTATTGCAAAAATTGCCCACTTGAAAGATCCAAGAATGATGGTTGTTTAGAACCGTGTAAAGGACACTTAAAGAGGAAGTTTATTAAAGAATGTTGGAGCAAATGTGGCTGTGGGAAACAGTGTGGCAATCGGGTTATCCAGCGAGGAATAACTTGCAATTTGCAGGTATTTTTCACTTCAGAAGGAAAAGGATGGGGTCTTCGTACCTTAGAGGACCTGCCAAAAGGTGCATTTGTGTGCGAGTTTGTTGGAGAAATTTTATCTATTAAAGAGTTGCACGAGAGGAACATGAAATGCACTGAAAATGGGAAATATACATACCCAGTACTACTGGATGCAAATTGGGATTCAGGATATGTGAAGGACGAAGAAGCTCTATGCTTGGATGCAACTTCCTTTGGCAACACTGCTAGGTTTATCAATCACAGATGTTCTGATGCAAACTTGATTGAGATCCCAGTTGAAGTTGAGGATCCTGGTCGTTATTACTATCATTTTGCCTTTTTCACTTCCAGAAAAATAGCAGCACAGGAAGAGCTAACATGGGATTATGGCGTTGACTTTGATGACCATGATCATCCTGTCAAGTTGTTCCAGTGCAAATGTGGCAGTAAATTCTGCAGGAACATGAAGAGATCAAACAGATCAATTAGATCTGCGTCAATTGAAGGATGA 2460 0.415 MAPSQKERALAACRAMSSLGIDDSKVKSVLKKLLKVYDKNWEPIEAENYRVLADAIFEDDDNMVPEQKKRSQTANVHNPRHSLSSSITNHQETEAECEEAQMHIETARPLKRLRLQGQESQALHPLTNSAPSPPSKKAKLEDAGKKPQNKPVSSDGNPRIEARPLPLQDGIIDKGKQPASPQVSHRGRRLTSERASPSIPSKEPTVEPGKFLLPNKQMPRIHTLIIPKDEPIDELPDYEMPITVIPPEISSARDSSMKNGVAGKRSGCVTVTSSQSRDGVRDEDVIPTSNEQATCNVEIASSTLGEVKLSLSCSSALRGSDFHIPSRDQLIEMMEDKCLHSYKITDPNFSVKKLLRDICDCMLEFRNDSNDDSQEGSMINSSVDVLKEPQAPGTLSVVGNKDLDTSSSFSNGSINVKSSDALVSPRSLLHLAHLNGLNDAVPVSKMDRTNDFSQSNVRKELEDPMSPNSHSLVVVPQHQLTAEDIRSFHDANDLTKGEENVKIPWVNETNNDFAPSFNYIPQNLVFQDAYVNISLSRIGGEDCCSTCMGNCVLSTPCACANKTGGEFAYNAKGLLKEAFLEECVAISRNPHQHFFYCKNCPLERSKNDGCLEPCKGHLKRKFIKECWSKCGCGKQCGNRVIQRGITCNLQVFFTSEGKGWGLRTLEDLPKGAFVCEFVGEILSIKELHERNMKCTENGKYTYPVLLDANWDSGYVKDEEALCLDATSFGNTARFINHRCSDANLIEIPVEVEDPGRYYYHFAFFTSRKIAAQEELTWDYGVDFDDHDHPVKLFQCKCGSKFCRNMKRSNRSIRSASIEG 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02491 819 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 819 IPR025776 -
Pumo3g02491 819 ProSiteProfiles SET domain profile. 647 780 IPR001214 GO:0005515
Pumo3g02491 819 MobiDBLite consensus disorder prediction 68 91 - -
Pumo3g02491 819 MobiDBLite consensus disorder prediction 63 100 - -
Pumo3g02491 819 Pfam Ubiquitin-binding WIYLD domain 4 62 IPR018848 -
Pumo3g02491 819 MobiDBLite consensus disorder prediction 122 212 - -
Pumo3g02491 819 CDD SET_SETDB-like 515 780 - -
Pumo3g02491 819 Gene3D SET domain 476 789 IPR046341 -
Pumo3g02491 819 ProSiteProfiles Pre-SET domain profile. 539 644 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pumo3g02491 819 Pfam SET domain 659 780 IPR001214 GO:0005515
Pumo3g02491 819 FunFam SET-domain containing protein lysine methyltransferase family protein 494 805 - -
Pumo3g02491 819 Gene3D - 1 62 IPR043017 -
Pumo3g02491 819 SMART preset_2 491 631 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pumo3g02491 819 Pfam Pre-SET motif 495 639 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pumo3g02491 819 MobiDBLite consensus disorder prediction 250 282 - -
Pumo3g02491 819 SUPERFAMILY SET domain 486 788 IPR046341 -
Pumo3g02491 819 SMART set_7 647 786 IPR001214 GO:0005515
Pumo3g02491 819 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 813 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02491 Pumo-Chr3 37738613 37745590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02491 623 805 C2H2 Transcription Factor Family AT2G23740 41.270 3.17e-30 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pumo3g02491 Pre-SET 1.6e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02491 - - gmx:100778335 1441.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02491 3 37738613 37745590 Pumo3g02491 3 37738613 37745590 ECH
Pumo5g03812 5 88075205 88081423 Pumo3g02491 3 37738613 37745590 PCT
Pumo3g02491 3 37738613 37745590 Pumo5g02901 5 76304628 76311377 PCT