Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02483 ATGGCCATGAGTGCAGCCTTATCCACTGGCTCTCACTCCCGAAATGGATTCCGTTTCTCGGACCAGGAAAATGGAGATTTCAATCAACAGCAGTGGCAACACAATGATGATCAACCATTCTCGGCAGCAGGAAGTGTTGCTAATGAGGATTTTGAAGGGCAGAAAGCATTCTATAGCAATGCAGAGAAACGGAAAGAAAAGACAAGTTTAATGAGCAATGACCAAGAAGATGACTACCTTTTGGCTGAGTCAAGGCAACCTTTGTGGCGCAAAGTTCCAATTTCTTCAAGCCTAATCAACCCATATAGAATAGTCATAATCATGCGTCTCGTTTTCCTAGTTTTCTTCTTCCACTTGCGCATCACAACTCCAGTGCATGATGCACTTGCCTTATGGATAATCTCTGTAGTCTGTGAAATCTGGCTTGCACTATCTTGGCTAGTTGACCAAATCCCCAAGTGGTTCCCTATTACTCGTGAAACTTACCTTGAACGTTTGTCCATAAGGTTTGAGCGTGAAGGGGAGCCAAACCTTCTAGCCCCAGTTGATATCTTTGTGACCACTGCAGACCCTTTTAAGGAACCACCTATTATAACTGCAAACACGGTTTTATCAGTGTTGTCTGTTGATTATCCTGTTGAGAAGGTTAGCTGCTATGTCTCAGATGACAGTGCATCTATGCTTCTCTTTGATACCTTGTCAGAAACTGCTGAGTTTGCTAGAATATGGGTTCCCTTTTGTAACAAGTATAACATTGAGCCAAGGGCGCCTGAGTTTTATTTCTCTCAGAAACTTGATTACTTGAAAGATAAGGTGCACCCCACGTTTGTTAAGGATCGCAGGGCCATGAAGAGAGAGTATGAAGAATTCAAGGTGAAAATTAATGTTTTGGTTGCAAAGGCTCAGAAAAAACCAGAAGAGGGGTGGGTGATGCAAGATGGTAACCCATGGCCTGGGAACAACATTGAAGATCATCCAGGAATGATTCAGGTTTGTCTAGGAAGTGCTGGTGCACTGGACATAGAAGGCAAGGAACTGCCAAGGCTTGTGTATGTTTCACGGGAAAAACGTCCTGGCTATCAACACCACAGTAAAGCTGGTGCCATGAATGCTCTGGTTCGAGTTTCTGCTGTGCTTAGCAATGCACCTTTTGCATTGAATCTGGACTGTGACCAATACATCAATAATAGCAAGGTTCTTAGGGAGGCTATGTGCTTTTTAATGGACCCCCAAATTGGAAAGAAGTTCTGTTATGTCCAATTCCCACGAAGGTTTGATGGCATTGATTGCAATGACAGATATGCTAATCACAATACTGTTTTCTTTGATATCAACATGAAATGCTTTGATGGGATTCAAGGTCCTGTTTATGTTGGTACTGGATGTGTGTTCAACCGGCAGGCACTATATGGCTGTGAGCCACCTTCTGATAAAAGGCCAAAGATGACGAGTTGCTGCTGGCCTTCAAGCTGCAGCTGTTGTTCTGGTGACTCTCAGTCCACATCTGATGATGACGAGACTGATCAAGAGCTTGAAGACTTTGATGAGGAAGAGGAATTACCCTTCATGTCCTTGAAAAGTTTAGAGAAACGATTTGGACAATCACCGGTTTTCATTTCTTCTGCTTTGATGGAAGATGGTGGACTTCCAAAAGGAACCAATGCTCGATTACTGATTAAGGAAGCAATTCATGTTATAAGCTGTGACTATGAAGAGAAAACTGAATGGGGAAAAGAGATTGGGTGGCTTTATGGCTCAGTCACAGAAGACCTCTTAACTGGGTTTAACATGCATTGTAGAGGATGGAAATCAGTGTACTGCATGCCAAAGAAAGCAGCTTTCAAGGGATCTGCTCCTATAAATCTATCAGACCGATTACACCAAGTTCTGAAATGGGCTTCGGGTTCTACTGAGATTTTCTTTAGTGGCTATTGCCCTTTGTGGTATGGCTATAGCGGAAAACTGAAATGCCTGCAGAGATTGGCCTACACTAATTCCGTTGTCTATCCATTCACTTCCATCCCTCTGCTGATCTACTGTACAATTCCAGCTGTCTGTCTTCTGACTGGAAAGTTCATCATCCCCACTCTGTCAAACCTTGCTAGCATTTGGTTAATGGCCTTATTTATCTCCATCATCTTAACCTGTGTGCTAGAGCTTCGCTGGAGTGGGGTTAGCATTCAGGACTGGTGGCGCAATGAGCAATTCTGGGTCATTGGGGGAGTTTCTGCACACCTTTTTGCTGTATTTCAAGGTCTCCTAAAAGTTGGTGGAGTACACACTAATTTCACTGTGAGAGCAAAATCAGCAAATGACACTGCATTTGGACAGCTCTATCTCTTCAAGTGGACTACTCTTCTCATCCCACCAACGAGTCTTGTAATCATAAATATGGTGGGAATTGTGGCTGGAATTTCTGATGCCATTAACAATGGCTATGACTCATGGGGACATTTCTTTGGGAAGCTTTTCTTCTCCTTGTGGGTCATTGTGCACTTATATCCTTTCCTCAAAGGTCTAATGGGAAGGCAAAACAGAACCCCTACCATTGTAGTCCTCTGGTCAATACTTCTAGCCATAATTTTCTCAATGATTTGGGTGCGAATTGATATTTTCTTGCCCAAGCAGACAGGTCCAGCACTCAAACAGTGTGGGATAAGATGCTAA 2667 0.4327 MAMSAALSTGSHSRNGFRFSDQENGDFNQQQWQHNDDQPFSAAGSVANEDFEGQKAFYSNAEKRKEKTSLMSNDQEDDYLLAESRQPLWRKVPISSSLINPYRIVIIMRLVFLVFFFHLRITTPVHDALALWIISVVCEIWLALSWLVDQIPKWFPITRETYLERLSIRFEREGEPNLLAPVDIFVTTADPFKEPPIITANTVLSVLSVDYPVEKVSCYVSDDSASMLLFDTLSETAEFARIWVPFCNKYNIEPRAPEFYFSQKLDYLKDKVHPTFVKDRRAMKREYEEFKVKINVLVAKAQKKPEEGWVMQDGNPWPGNNIEDHPGMIQVCLGSAGALDIEGKELPRLVYVSREKRPGYQHHSKAGAMNALVRVSAVLSNAPFALNLDCDQYINNSKVLREAMCFLMDPQIGKKFCYVQFPRRFDGIDCNDRYANHNTVFFDINMKCFDGIQGPVYVGTGCVFNRQALYGCEPPSDKRPKMTSCCWPSSCSCCSGDSQSTSDDDETDQELEDFDEEEELPFMSLKSLEKRFGQSPVFISSALMEDGGLPKGTNARLLIKEAIHVISCDYEEKTEWGKEIGWLYGSVTEDLLTGFNMHCRGWKSVYCMPKKAAFKGSAPINLSDRLHQVLKWASGSTEIFFSGYCPLWYGYSGKLKCLQRLAYTNSVVYPFTSIPLLIYCTIPAVCLLTGKFIIPTLSNLASIWLMALFISIILTCVLELRWSGVSIQDWWRNEQFWVIGGVSAHLFAVFQGLLKVGGVHTNFTVRAKSANDTAFGQLYLFKWTTLLIPPTSLVIINMVGIVAGISDAINNGYDSWGHFFGKLFFSLWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLAIIFSMIWVRIDIFLPKQTGPALKQCGIRC 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02483 888 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 292 474 IPR029044 -
Pumo3g02483 888 FunFam Cellulose synthase 299 473 - -
Pumo3g02483 888 MobiDBLite consensus disorder prediction 1 39 - -
Pumo3g02483 888 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 85 855 - -
Pumo3g02483 888 Pfam Cellulose synthase 182 882 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pumo3g02483 888 SUPERFAMILY Nucleotide-diphospho-sugar transferases 193 704 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02483 Pumo-Chr3 37675773 37680664 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02483 73 888 Cell Wall Biosynthesis AT5G17420 70.109 0.0 1234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02483 K10999 - gmx:100777278 1679.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02483 3 37675773 37680664 Pumo3g02483 3 37675773 37680664 ECH