Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02474 ATGGTTGGTTGTGGGGGACTGTGGAGGGTTCTTATGAGGAGTTCTGGAACTACTGAGTTGAATACCTTTTACCCCATTAAACCAGAATGCCAAGCAGATGTTCCAGCCACTCGTTTTAAACCAAGGGCTGGCAAAACTCTAAGTCAAAGAAGGTGGCAGGCATCATTCTCTGAAGATGGTCGCTTGGATATTGCAAAAGTGCTAAGACGAATTCAGCGAGGGGGTGTCCATCCTTCAATCAAAGGGGAAGTGTGGGAGTTCTTGCTTGGTTGCTATGATCCTAACAGTACACTTGAAGAACGGAATGAGCTCAAGCAACGCAGGAGGGGGCAGTATGATATGTGGAAAGCTGAATGTCAAAAGATGGTCCCAGTCATTGGTAGTGGAAAATTTATTACTACACCACTCGTTGATGATGAAGGCCAGCCAATAGATCCTTCTTCAGTAGGCGTCCAGACTTCAGATAAGAAAGTTTTGCAGTGGATGCAGTTATTACATCAGATTGGTCTGGATGTTCATCGAACAGATCGAGCACTTGTCTTTTATGAGACTGAAGTTAATCAAGCAAAACTTTTTGATGTTCTAGCAATTTATGCTTGGTTGGACAATGATATTGGTTATGTGCAAGGAATGAATGATATTTGCTCACCTTTGATTATGCTTATTGAGAATGAAGCAGATTGCTACTGGTGCTTTGAGCGCGCAATGCGAAGGATGAGAGAGAACTTCAGGTGCAGTGCAAGTTCAATGGGGGTCCAATCTCAGTTGGCTACACTCTCACAGATAATGAAAACAGTTGATCCCAAGCTTCATCATCACCTTGAGGATTTAGATGGAGGAGAATATCTCTTTGCATTTCGCATGCTTATGGTTCTTTTCCGCAGAGAATTTTCTTTTGCAGATACTTTGTATCTTTGGGAGTTGATGTGGGCCATGGAATACAACCCAAACATCTTCACAAAATATGAGGATCCAGATCATGCTAAAGCAAAAGGCCCCACACCTGCAACAAACGACAAACTTTTGAAGCAATATGGAAAATTTGAGAGAAAAAATGTGAAGACTGGGCATACAGAGGAAAATAGTGCATCTATCTTGGGTGACATAACCTCAAATCTTGATGCTAAAAAAGCATGCAATGAAGCATTGAAAATTCAGAAAAAATACCTGAGCAAGGCCAAGAAGCCATGA 1191 0.4198 MVGCGGLWRVLMRSSGTTELNTFYPIKPECQADVPATRFKPRAGKTLSQRRWQASFSEDGRLDIAKVLRRIQRGGVHPSIKGEVWEFLLGCYDPNSTLEERNELKQRRRGQYDMWKAECQKMVPVIGSGKFITTPLVDDEGQPIDPSSVGVQTSDKKVLQWMQLLHQIGLDVHRTDRALVFYETEVNQAKLFDVLAIYAWLDNDIGYVQGMNDICSPLIMLIENEADCYWCFERAMRRMRENFRCSASSMGVQSQLATLSQIMKTVDPKLHHHLEDLDGGEYLFAFRMLMVLFRREFSFADTLYLWELMWAMEYNPNIFTKYEDPDHAKAKGPTPATNDKLLKQYGKFERKNVKTGHTEENSASILGDITSNLDAKKACNEALKIQKKYLSKAKKP 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02474 396 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 251 323 IPR035969 -
Pumo3g02474 396 ProSiteProfiles TBC/rab GAP domain profile. 75 313 IPR000195 -
Pumo3g02474 396 SMART tbc_4 72 331 IPR000195 -
Pumo3g02474 396 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 45 312 - -
Pumo3g02474 396 Gene3D - 249 391 - -
Pumo3g02474 396 FunFam Ypt/Rab-GAP domain of gyp1p superfamily protein 148 243 - -
Pumo3g02474 396 Pfam Rab-GTPase-TBC domain 153 314 IPR000195 -
Pumo3g02474 396 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 51 273 IPR035969 -
Pumo3g02474 396 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 148 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02474 Pumo-Chr3 37583743 37590509 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02474 - - gmx:100785775 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02877 5 76059088 76065884 Pumo3g02474 3 37583743 37590509 PCT