Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02470 ATGGATTCTGCAAGGAGTTGGCTTCAGAAGTTCCAGCCTCGAGATAAAACCAGGGCTGCTGGGAAGAAAAAGGAGGAGGATAGTAATGGAGGAAACCAGGATTCGAATGAAGCCGCCGTGGATGAAGCATTGCTCTCCAGTGTCACGAAGCAGAAGGTGGCAGCAGCAAAGCAGTACATTGAAAATCATTACAAGGAGCAAATGAAGAACCTTCAGGAGAGGAAGGAGCGACTTTCGAATGGGGTGTGCGATGAATTTTTTGGTGACTGTGAGGATGAATTTCCTGTTTATCAAGGATTGCACACTGTTTCGGAACCAATGTTTGCGTTTTTAGCTACCCTGGATGCTTTCAATTCTGTTTCCTTTAAGCCAGTGCCGAGTTTTGTTTCCTTCTTGGGAGAAATTCCACTCCAAGGAGACTTCTCTGCTGAACATATGATCTTTGGAGTTGAGGGTGCTGATCCAGATAGGAGAGATAAGTTAATTGAGCTGCTTGATATCGATCTACAGTGGCGAATGCACAAGGTATCTGATGGGCAGCGGCGTCGAGTGCAAATCTGTCTTGGTCTTCTTCATCCGTATAAGGTTCTCTTGCTGGATGAGGTTACTGTTGATCTGGATGTTGTTACTCGGATGGATTTATTGGACTTCTTTAGGGAAGAATGTGAACAGAGAGAAGCTACAATCGTATATGCAACTCATATTTTTGATGGACTAGAGACATGGGCAACTCATTTGGCATACATACAAGATGGTGAACTGAGAAGAGCAGAAAAATTATCAGATGTTAACGAGTTGAAATCTTCAACTAATCTGCTGTCTGTTGTTGAGGCCTGGCTCCGTGCTGAAACAAAGATTGAAAAGAAGAACCCTGTCCAAAAGACTTCTGTTGCTAGTTCTCCTTTCTTTTCATCCAGACACATGGCGTACTATCGATAG 939 0.4377 MDSARSWLQKFQPRDKTRAAGKKKEEDSNGGNQDSNEAAVDEALLSSVTKQKVAAAKQYIENHYKEQMKNLQERKERLSNGVCDEFFGDCEDEFPVYQGLHTVSEPMFAFLATLDAFNSVSFKPVPSFVSFLGEIPLQGDFSAEHMIFGVEGADPDRRDKLIELLDIDLQWRMHKVSDGQRRRVQICLGLLHPYKVLLLDEVTVDLDVVTRMDLLDFFREECEQREATIVYATHIFDGLETWATHLAYIQDGELRRAEKLSDVNELKSSTNLLSVVEAWLRAETKIEKKNPVQKTSVASSPFFSSRHMAYYR 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02470 312 MobiDBLite consensus disorder prediction 1 37 - -
Pumo3g02470 312 FunFam ABC transporter I family member 21 141 307 - -
Pumo3g02470 312 Gene3D - 114 301 IPR027417 -
Pumo3g02470 312 PANTHER SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE 134 280 - -
Pumo3g02470 312 Coils Coil 61 81 - -
Pumo3g02470 312 MobiDBLite consensus disorder prediction 9 31 - -
Pumo3g02470 312 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 48 276 IPR003439 GO:0005524
Pumo3g02470 312 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 266 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02470 Pumo-Chr3 37535409 37538292 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02470 1 77 AGC Kinase Gene Family AT1G03920 54.348 1.11e-19 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02470 K12608 - gmx:100788503 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02470 3 37535409 37538292 Pumo3g02470 3 37535409 37538292 ECH