Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02424 ATGGAGTCTGAAACCCCTGCTTTGTTGCTTCTTCTTTTGTTTGCAACTCTACTTTGGTTCTTAGCCACAACACTATCCAAAGGCAAATCTCCACCACCCTCTCCTCCTTCTTCCACCACCATTCCCAAAGCATACCCTATCATCGGTTCCGTGTTCTCCATCGCCAACAACAACCACCGCCGCATCCACTGGATCTCCGACATCCTCCACGCCACCCCCTCCTCCACCTTCGTCCTCCACCGCGCCTTCGGCTCCCGCCAGGTCTTCACGGCCAACCCCGCCGTGGTCCAGCACATTCTCAAGACCAACTTCCCAGTGTACCACAAGGGCCCGACCTTAAACCGGGCCCTTGGGGACTTCCTCGGCCAGGGTATCTTCAACTCGGACGGCTCAAACTGGAAACTCCAGCGCCAAATCTCCAGCCACGAGTTCAACACCCGCGCCCTCCGCAAGTTCGTTGAAACTGTCGTCGATGCCGAACTCTCCGACCGCCTTGTTCCTCTCCTTGCCGCTGCTGCCCAAAATAAAACCATAATTCCGGACTTTCAAGACATCCTCCAACGCTTCACCTTCGACAACATCTGCAAAATCGCGTTCGGCTTCGATCCGGAATACCTCCTCCCCTCCCTCCCGGAAACCTCCTTCGCCACCGCCTTCGACGACGCCACCAGAATCAGCAGCGAGAGGTTCAACGCGGCCTTCCCTCTGTACTGGAAAATCAAGAGCCTCCTCAACCTAGGCTCCGAGAAGTGCCTCAGGGAAGCAATCTCCGAAGTGAGAGGCCTGGCGAGGAGAATCATTATGGAAAAGAAGAAAGAGTTTCAAGAAAAGGAGACTCTGGACTCGGTGGATCTGTTGTCACGCTTTTTATGCTCTGGCCATTCCGACGCAGAGTTCGTTATGGATATCATCATAAGCTTTATCCTGGCGGGGAGGGACACCACCTCCGCGGCGCTCACGTGGTTCTTCTGGCTGCTCTCGAACCACCCGCACGTGCAGGACGAGGTTGTCAAGGAGGTGGCGGAGAAGGACATGGTTTACTCGCACGTGTATGACGAAGTGAAGGACATGGTTTACACGCACGCCGCGCTGTGCGAGAGTATGAGGCTGTACCCGCCGGTTCCCGTGGATACTAAAGAGGCGGTGAACGACGACGTTTTGCCGGATGGGACTTTGGTGAAGAGAGGATGGAGAATGGCGTATCATATTTACGCGATGGGGCGGTCGGAGAAGATATGGGGCGAGGATTGGGCCGAGTTTCGGCCCGAGAGGTGGCTGAGTTGGGGCGAGGTGGAAGGGAGGTGGAAATTCGAGGGGGTGGATGCTTTTACTTATCCGGTGTTTCAGGCTGGGCCAAGGGTGTGTTTGGGTAGGGAAATGGCGTTTTTGCAAATGAAAAGAGTGGTCGCTGGGATCATGAAAAGGTTCAAAGTGGTGTCGGAGGTGGCGGAACCGGAATACGCTGGGTACCTTACTTCTTTCATGATTGGTGGCTTCCCCGTGAGTATTGAGAACCGTAGCAGTCACACAGATATTGTGGAATGA 1545 0.5495 MESETPALLLLLLFATLLWFLATTLSKGKSPPPSPPSSTTIPKAYPIIGSVFSIANNNHRRIHWISDILHATPSSTFVLHRAFGSRQVFTANPAVVQHILKTNFPVYHKGPTLNRALGDFLGQGIFNSDGSNWKLQRQISSHEFNTRALRKFVETVVDAELSDRLVPLLAAAAQNKTIIPDFQDILQRFTFDNICKIAFGFDPEYLLPSLPETSFATAFDDATRISSERFNAAFPLYWKIKSLLNLGSEKCLREAISEVRGLARRIIMEKKKEFQEKETLDSVDLLSRFLCSGHSDAEFVMDIIISFILAGRDTTSAALTWFFWLLSNHPHVQDEVVKEVAEKDMVYSHVYDEVKDMVYTHAALCESMRLYPPVPVDTKEAVNDDVLPDGTLVKRGWRMAYHIYAMGRSEKIWGEDWAEFRPERWLSWGEVEGRWKFEGVDAFTYPVFQAGPRVCLGREMAFLQMKRVVAGIMKRFKVVSEVAEPEYAGYLTSFMIGGFPVSIENRSSHTDIVE 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02424 514 Gene3D Cytochrome P450 34 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g02424 514 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g02424 514 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g02424 514 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g02424 514 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g02424 514 PANTHER CYTOCHROME P450 25 500 - -
Pumo3g02424 514 CDD CYP86A 76 499 - -
Pumo3g02424 514 SUPERFAMILY Cytochrome P450 36 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g02424 514 Pfam Cytochrome P450 42 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02424 Pumo-Chr3 36759441 36761409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02424 9 506 Cytochrome P450 AT5G63450 45.365 5.58e-142 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02424 K20769 K20768 gmx:100781020 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02825 5 75376167 75378799 Pumo3g02424 3 36759441 36761409 PCT