Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02419 ATGACAGACATATTTGAGAAGCAGCCATCTCCTGATTCTTCAAATTATGCATCAAACAGTGGTCTATGTGAGGAAGATAAGAAGATTGGATATAGAGCTGCAACATCAAAACATTTATATCTTTTGGCCAACAACTCTGCTCTTAACTTCTTACCCATCAAAATTGACCTGAATTGTGCTCGCATGGTGATGGCAGAGATGGTGGGTACTTTTATTTTGATGTTCTGTGTATGTGGAATCACTGCAAGCACACAATTCCAAAATGGTGCTGTGGGCCTTCTGGAGTATGCAGCTACAGCAGGATTAACAGTGGTGGTGATAATTTTCTCTATAGGGCCAATATCTTGTGCGCACGTTAACCCAGCTGTCACAATAGCCTTTGCAACAATGGGTCAATTTCCATGGTTCAAGGTTCCAGTTTACATAATAGCACAGACAGTAGGTTCTATGTCGGCAACATACATAGGTAGCCTTGTATACGGCATAAAATCAGATGCTATGATGACCATGCCACTCCAAGGGTGCAACTCTGCCTTCTGGGTGGAGGTTATTGCAACTTTCATCATCATGTTCCTCATTGCAGCTTTGACATCTGAATCTCAATCAGTGGGCCATTTATCTGGCTTTGTTGCTGGAATAGCAATTGGGCTTGCTGTACTAATCACAGGGCCCGTTTCAGGTGGATCAATGAATCCTGCAAGATCACTAGGTCCAGCAATTCTCTCATGGAAATTCAAGAACATATGGATATACATGGTAGCCCCTAGTGGTGGAGCTGTAGCAGGAGCTGCAATGTTTCGTTTCCTACGCCTTAGAGACCAACATTCTAGTCCTTTGTCCTCCCCAAACATCAGTGATGTTGGTCGTTCCATACCCTTTTGCTCAAAGTACAATGGCAAGCCCACCTTCACACAGATCGTGGTGGCTTCCTCTATTGGATTGATATTCGCCGCAGCAATGCATTATCGCGTTAAAAATATGAGAGATCGAAAGATCATTCCACGTCTGAGAATATCAAAGGCAAACCAAACTCCAAAGCTTGAAAAGTTCTCTCATTACGTAGCTAGGCAAATGGGGTTCAAAGACAGGAGAAATTGTCCTCATCTTTGTAAATTGGCTTCTGAATACATAAGAAAATCCGAGGGATGTGAAGATGATCTCTACGCCTTCTTCGAGAACGAACCAGATGCGGATTCACTTTTCGTGAAGCTTGTGGAGGAGTTTGAGAGATGCATTCTTAGTTACTTTGCATTCCATTGGACCCATGGTGATGTTTTGATAAGTCAGGTGTTTGGCTCTGAAGTTGAACCAAAAGCAAAGCTCAGGCACATAGTTATGGCAGCAACTAGGGAACAAAGGTTCGAGAGAGTGACCAAGAATCTGAAGGTGGCTAGAGTTTTCAACACATTAGTGGAAGAAATGAAAGCAATGGGACTTGTCACAAATGATGACTCTCGATGCACAGAGGTGATGGCTCCAGTAGCTCACAGTGATAGGAGCCCAGTGCTTCTTTTCATGGGTGGTGGCATGGGAGCTGGCAAGAGCACTGTGCTTAAGGACATTCTCAAAGAACCTTTCTGGGCAGGAGCAGCAGGCAATGCTGTCATCATTGAGGCAGATGCCTTCAAAGAATCAGATGTCATCTATAAGGCCCTCAGTGCAAGAGGGCATCAGGACATGATTCGAACAGCTGAACTGGTGCACCAATCATCCACTGATGCAGCCTCATCCCTCTTAGTAACAGCACTAAATGAGGGGCGTGATGTAATTATGGATGGCACACTCTCCTGGTTACCATTTGTTGTGCAGACAATAACAATGGCTAGAAATGTCCACCGCCGCCGTTACCGCATGGGACCTGGCTACAAGGTGAATGAGGATGGAACTGTGACCGAAAACTATTGGCAGCGAATTGAGGGGGAAGAGCCAGAACAAGTTGGAGGCAAAAGGAGAAAACCATATAGGATAGAGCTGGTTGGAGTAGTATGTGATGCTTATCTTGCAGTCATTAGAGGCATAAGGTAG 2025 0.4464 MTDIFEKQPSPDSSNYASNSGLCEEDKKIGYRAATSKHLYLLANNSALNFLPIKIDLNCARMVMAEMVGTFILMFCVCGITASTQFQNGAVGLLEYAATAGLTVVVIIFSIGPISCAHVNPAVTIAFATMGQFPWFKVPVYIIAQTVGSMSATYIGSLVYGIKSDAMMTMPLQGCNSAFWVEVIATFIIMFLIAALTSESQSVGHLSGFVAGIAIGLAVLITGPVSGGSMNPARSLGPAILSWKFKNIWIYMVAPSGGAVAGAAMFRFLRLRDQHSSPLSSPNISDVGRSIPFCSKYNGKPTFTQIVVASSIGLIFAAAMHYRVKNMRDRKIIPRLRISKANQTPKLEKFSHYVARQMGFKDRRNCPHLCKLASEYIRKSEGCEDDLYAFFENEPDADSLFVKLVEEFERCILSYFAFHWTHGDVLISQVFGSEVEPKAKLRHIVMAATREQRFERVTKNLKVARVFNTLVEEMKAMGLVTNDDSRCTEVMAPVAHSDRSPVLLFMGGGMGAGKSTVLKDILKEPFWAGAAGNAVIIEADAFKESDVIYKALSARGHQDMIRTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWLPFVVQTITMARNVHRRRYRMGPGYKVNEDGTVTENYWQRIEGEEPEQVGGKRRKPYRIELVGVVCDAYLAVIRGIR 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02419 674 Gene3D Glycerol uptake facilitator protein. 44 278 IPR023271 -
Pumo3g02419 674 PRINTS Major intrinsic protein family signature 61 80 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g02419 674 PRINTS Major intrinsic protein family signature 212 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g02419 674 PRINTS Major intrinsic protein family signature 137 156 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g02419 674 PRINTS Major intrinsic protein family signature 249 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g02419 674 PRINTS Major intrinsic protein family signature 100 124 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g02419 674 PRINTS Major intrinsic protein family signature 181 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g02419 674 CDD MIP 61 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g02419 674 MobiDBLite consensus disorder prediction 1 20 - -
Pumo3g02419 674 ProSitePatterns MIP family signature. 118 126 IPR022357 -
Pumo3g02419 674 Pfam Zeta toxin 495 607 IPR010488 GO:0005524|GO:0016301
Pumo3g02419 674 Gene3D - 484 672 IPR027417 -
Pumo3g02419 674 SUPERFAMILY Aquaporin-like 58 275 IPR023271 -
Pumo3g02419 674 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 496 632 IPR027417 -
Pumo3g02419 674 PANTHER UNCHARACTERIZED 295 674 IPR044802 -
Pumo3g02419 674 Pfam Major intrinsic protein 59 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02419 Pumo-Chr3 36677903 36694583 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02419 56 278 Major Intrinsic Protein MIP AT4G10380 41.704 5.27e-52 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02419 - - pvu:PHAVU_007G178200g 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02419 3 36677903 36694583 Pumo3g02419 3 36677903 36694583 ECH
Pumo5g02822 5 75331718 75335985 Pumo3g02419 3 36677903 36694583 PCT