Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02414 ATGGAAGAGGTTGAACAAGCTAATAGAGTAGCTGTTGAAAGCTGTCATAGGGTTCTGAGTTTGTTGTCTCAACCAAGGGATCAGGTTCAGCATAGGAATTTAGTGGTGGAAACTGGGGAAGCTGTGGTGAGGTTCAAGAAGGTTGTTTCCATGCTTCACAATGGTTTGGGTCATGCGAGAGTGAGGAAGGTTAAAAACCCTCAAATCCCCTTTTCCCACCAAAGTATCTTCTTAGACAGCCCCAATTGCAAAACCAACAACCATCACTCAAAAAATCTGCAGTTTCCCCAAACCAGCTTTCCTGACAAATCAATTCAAGAACTGGGTTCAACCATTAAAAATTCACTCTCTCTTGGACAGCCCTCTTTGGAATTGAGCTCCAGTGGGAAAAATCCTCTTCACCTCACACAGCAGGCTTCATCAACTCACTATCACTTCTTTCAGCAGCAGCAACAGCAACAGCAAAGGTTGTTGCTGCTGCAGCAGCAGCAGCAACAACAACAACAACAACTGAAGCATCAGGCAGAAATGATGTTCCGAAGGAACAACAGTGGCATAAACCTGAATTTTGACAGCACTAGCTGCACACCAACAATGTCATCCACTAGGTCTTTTATTTCTTCCTTGAGCATAGATGGAAGTGTGGCTAACTTGGATGGAAGTGCCTTCCATTTAATAGGAGCTCCACACTCTTCTGATCAGAATTCGCAACAGCACAAGAGGAAATGTTCTGCCAGAGGTGATGAGGGAAGCTTGAAATGTGGGAGCAGTGCTAGATGCCATTGCTCTAAGAAGAGGAAACATAGAGTGAAGAGGGCAATTAAGGTGCCTGCTATCAGCAACAAACTTGCAGATATCCCTCCTGATGATTATTCATGGAGGAAGTACGGGCAGAAGCCAATCAAGGGCTCTCCTCACCCTAGGGGATATTATAAGTGCAGCAGCATGAGAGGGTGTCCTGCTAGGAAGCATGTTGAGAGGTGCTTGGAAGAGCCTACCATGCTAATTGTTACCTATGAAGGCGAACATAACCACCCTAAGTTACCAACACAATCTGCAAATGCATGA 1068 0.4513 MEEVEQANRVAVESCHRVLSLLSQPRDQVQHRNLVVETGEAVVRFKKVVSMLHNGLGHARVRKVKNPQIPFSHQSIFLDSPNCKTNNHHSKNLQFPQTSFPDKSIQELGSTIKNSLSLGQPSLELSSSGKNPLHLTQQASSTHYHFFQQQQQQQQRLLLLQQQQQQQQQQLKHQAEMMFRRNNSGINLNFDSTSCTPTMSSTRSFISSLSIDGSVANLDGSAFHLIGAPHSSDQNSQQHKRKCSARGDEGSLKCGSSARCHCSKKRKHRVKRAIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPTMLIVTYEGEHNHPKLPTQSANA 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02414 355 Pfam WRKY DNA -binding domain 289 346 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo3g02414 355 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 353 IPR044810 GO:0003700
Pumo3g02414 355 MobiDBLite consensus disorder prediction 228 248 - -
Pumo3g02414 355 Gene3D WRKY domain 273 349 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo3g02414 355 FunFam WRKY transcription factor 65 271 348 - -
Pumo3g02414 355 ProSiteProfiles WRKY domain profile. 282 348 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo3g02414 355 SUPERFAMILY WRKY DNA-binding domain 285 347 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo3g02414 355 Coils Coil 150 170 - -
Pumo3g02414 355 Pfam Plant zinc cluster domain 240 285 IPR018872 -
Pumo3g02414 355 SMART WRKY_cls 287 347 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02414 Pumo-Chr3 36609791 36613194 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02414 1 352 WRKY Transcription Factor Family AT2G30590 59.843 5.35e-127 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo3g02414 WRKY 5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02414 - - gmx:100170681 652.514