Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02378 ATGATTCCGAAGACTCCGTCACGGCACCTATCATTCGCGTTAGGGTTTCTGCTTTGCGCCACAATCCCCTTCGTTCACGGCGAATCGTCTACGTGCTTGACGGTCTACAAGAACGGCGGTGCTCCGGCGGTGTTCCAATCCCCAAAATGCCACCGCTGGAAGCTCTCCGATTACGATTCCCCTCCCCAAACCACCGCGCGTTGCCAAACCGCGATGCTCCAAGGCCGCAGAAACTCGCAAGAGGATCGCGCTCTCTGCGTCCTCGATGTTCGCATTCCCTTCCCCGGTGCGAACGGGATCAAGGAGGTTGCGGTCGGGATTGTGGCAGTTTTCGATGGTCATAACGGTGCGGAAGCTAGTGAGATGGCCTCGAAGCTTTTGGTGGAGTATTTCGTTCTGCATACTTATTTTCTTCTCGATGCCGCCTTTTCTGTAATTTCGAAGACGTCAACAGAGACGTTGCTTCACAAGAGAGATCGTGATCATGTAAACTTAATGCATAGATGGAAGGAGAATCTAGGTTTGGAGTGGCATGAACTGCATTTTGAAAGGTTTCAGAATACATTTTCTCCAAATTTTGATGATTCTTTTCACTTGGAAATTTTGAAGGAAGCGTTGTTGAGGGCAGTTCATGACATTGATGCAAAATTTTCTGAGGAAGCCTCTAGAAATAATCTTCACTCAGGATCTACAGCAACCATTGTTTTGATAGCGGATGATAAAATTTTGGTTGCCAATATTGGAGACTCTAAGGCCATCTTGTGCTCTGAAAATTTTCAGTCTCCCAGAGAGGCTAAAGGTGAGAAAGATTGTGAAATGTAA 822 0.472 MIPKTPSRHLSFALGFLLCATIPFVHGESSTCLTVYKNGGAPAVFQSPKCHRWKLSDYDSPPQTTARCQTAMLQGRRNSQEDRALCVLDVRIPFPGANGIKEVAVGIVAVFDGHNGAEASEMASKLLVEYFVLHTYFLLDAAFSVISKTSTETLLHKRDRDHVNLMHRWKENLGLEWHELHFERFQNTFSPNFDDSFHLEILKEALLRAVHDIDAKFSEEASRNNLHSGSTATIVLIADDKILVANIGDSKAILCSENFQSPREAKGEKDCEM 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02378 273 Gene3D - 49 268 IPR036457 -
Pumo3g02378 273 ProSiteProfiles PPM-type phosphatase domain profile. 67 273 IPR001932 -
Pumo3g02378 273 CDD PP2Cc 74 258 IPR001932 -
Pumo3g02378 273 Pfam Protein phosphatase 2C 199 258 IPR001932 -
Pumo3g02378 273 SUPERFAMILY PP2C-like 65 258 IPR036457 -
Pumo3g02378 273 PANTHER PROTEIN PHOSPHATASE 60 257 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02378 Pumo-Chr3 36099812 36101272 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02378 122 267 PP2C-type Phosphatase Gene Family AT3G63320 52.740 2.76e-37 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02378 - - gmx:100781476 525.783