Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02377 ATGATGAAAGAATTACGGGTGGAAACAGCTGGCGGTCAAGTCCAAAGTTGGGGCGGTGTGCCTCGCATAAATGGTCAGCTTGCTATTACACGGGCTATTGGTGATGTACTCTTTAAAAGTTATGGTGTTATATCTGCACCAGAAGTGACTGATTGGCAGCCTCTGACTGCTAATGATAGCTATTTGGTGGTGGCATCTGATGGTGTATTTGAGAAGATGAGCGTGCAGGATGTCTGTGATTTGATGTGGGAAGTACACCGTTTCAGTAACATGAGATCAGAGTGTACCCCTTCATCTTCCTATTCATTGGCAGATTTGATTGTTAATACTGCCTTCAAAAAGGGCAGTATGGACAATGTGGCAGCAGTTGTCATTCCTCTGGAGTCTGCTAAATCTTCTGCAAACTCGCTTAGAAGTTATATTGGAAAGAGAGATGCAGGTTTTCCATTATTTGGTCTGCAGCAAACTGCTTCCAAAAGCTCAGTTAATGACATCACATCTGATCATATGCACTTGGAGCACCCTCATCTGGTAGATACCAAGTTTAAGCGAATATTGGTTGAAGTAAAAGATGGCGATTTTGGATGCTTTTATTTATCTGAAAATCTTGATGAGCCAGAGGACTCTAAGCAGATTGCCAAAAAAACTGACTGGGAAGACTATTTGTATGAACTACCTCAGCCTCTACCAGATGCCCTTCATCAACATGCCACTTCAGGTGGTCCTGTAAATTTATACAATAACCAAAACTTTTGCTTTCACCTTGGTCCAACTGTTAATGAAGCCGAAGACCAATGCATAAATCCTGAAGGCTTTGCCAGTTTCATTGGTCTTCTTGAATCAATTCCTTTACATGATACTGGTTCCAGTAATGGGTCTTCCGATTATTCAATGCCTGATTTAAGGTATGTATTGAAGAAGAGTTTTGGCCGTGGATCATTTGGTGAAGTATGGTTGGCTTTTCATTGGAATTGTAATCAAGATAGTAATGCTGCAAAAATGAGCAAGGATGACAAAAATACAAACAGCAGCTCAACTGCTTCTGATTGTCAGGATGGTCCTTCTAACTACACCCTGTACATTTTGAAACGTATAATGGTGGAGAGGGGGTCTGCTGTTTACTTAAGTGGGCTGAGGGAGAAGTATTTTGGAGAAATTTTCTTAAATGCCTCTACATGCTTTGAGGATCCACTATCAGCTGGAAAATCAAACTGTGTCTTGGAAACATCACAATTTGGTCCTGATAATTCATTTCCAAACAAATTTCGGCTACAAAGAACCACATATGAAGAAGGTTTGAACCATATTGCAAGATATGTGGAGTCTTTTGAATCTCAAGCCAATGAAATATGGCTTGTATTTAGTTATGAAGGTGTGTCATTGTCAAAACTTCTATATGCTGTGGAAGATGCATATGGTACTGCTGAGAAAGAAAGACTAGAGCAAGTTAAACATGTTCAGATACTACGTCCATCAAAGTGGTGGCATTGGTTGAAAACGACAGAAGAAGGGCAAATGGAGATGTGCAACCTTATCTGGCAGCTGTTATTAGCTCTCAAGTCCTGTCACGATCGCAACATCACACACAGAGATATTAAACCTGAGAATATGGTGATATGCTTTGAAGATCAGGAAACGGGGAGATGCTTGAAAGAAATTCCCACTAAAGTTAATAATTTTTCCACCAAAATGCGTATTATTGACTTTGGAAGTGGAATTGATGAATTCACATTAAAGCATTTATATGGTTCCACCGGGCCTTCTAGAGCTGAACAAACCTATGAGTATACACCTCCTGAAGCTTTGCTAAACACTACATGGTATCAAGGGCCAACAAGCTCAACTTTGAAATATGACATGTGGAGCGTTGGTGTTGTGATGTTAGAGTTGGTCTTAGGGACACCAGATGTTTTCCAGATAAATGCTTTAACACGTGCTCTCTTAGATCAGCATCTAGAAGGCTGGAATGAGGGTGTGAAGGAGCTGGCATACAAACTTAGATCGTTCATGGAATTGTGCATTTTAATCCCTGGGATCTCCAGGTCCAGCAGTTCCTCAAAGAAGTATCACACAGTGAACCAAGTTGGAGTTTCACCTGCATCTTGGAAATGCTCTGAAGAATTCTTTTCTCGTCAAATTAAGAATCGAGATCCCCTAAAAATAGGTTTTTCAAACATATGGGCTTTACGGTTAGTGCGGCGTCTATTACATTGGGATCCAGAGGATCGGCCAAGTATTGATGAGGCTCTTCAACATCCTTATTTCCAACATCTCCCAAGAGAATGA 2286 0.4073 MMKELRVETAGGQVQSWGGVPRINGQLAITRAIGDVLFKSYGVISAPEVTDWQPLTANDSYLVVASDGVFEKMSVQDVCDLMWEVHRFSNMRSECTPSSSYSLADLIVNTAFKKGSMDNVAAVVIPLESAKSSANSLRSYIGKRDAGFPLFGLQQTASKSSVNDITSDHMHLEHPHLVDTKFKRILVEVKDGDFGCFYLSENLDEPEDSKQIAKKTDWEDYLYELPQPLPDALHQHATSGGPVNLYNNQNFCFHLGPTVNEAEDQCINPEGFASFIGLLESIPLHDTGSSNGSSDYSMPDLRYVLKKSFGRGSFGEVWLAFHWNCNQDSNAAKMSKDDKNTNSSSTASDCQDGPSNYTLYILKRIMVERGSAVYLSGLREKYFGEIFLNASTCFEDPLSAGKSNCVLETSQFGPDNSFPNKFRLQRTTYEEGLNHIARYVESFESQANEIWLVFSYEGVSLSKLLYAVEDAYGTAEKERLEQVKHVQILRPSKWWHWLKTTEEGQMEMCNLIWQLLLALKSCHDRNITHRDIKPENMVICFEDQETGRCLKEIPTKVNNFSTKMRIIDFGSGIDEFTLKHLYGSTGPSRAEQTYEYTPPEALLNTTWYQGPTSSTLKYDMWSVGVVMLELVLGTPDVFQINALTRALLDQHLEGWNEGVKELAYKLRSFMELCILIPGISRSSSSSKKYHTVNQVGVSPASWKCSEEFFSRQIKNRDPLKIGFSNIWALRLVRRLLHWDPEDRPSIDEALQHPYFQHLPRE 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02377 761 ProSiteProfiles PPM-type phosphatase domain profile. 1 127 IPR001932 -
Pumo3g02377 761 SUPERFAMILY Protein kinase-like (PK-like) 302 758 IPR011009 -
Pumo3g02377 761 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Pumo3g02377 761 Pfam Protein phosphatase 2C 6 120 IPR001932 -
Pumo3g02377 761 Pfam Protein kinase domain 504 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g02377 761 SUPERFAMILY PP2C-like 5 128 IPR036457 -
Pumo3g02377 761 SMART serkin_6 303 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g02377 761 Gene3D Transferase(Phosphotransferase) domain 1 493 756 - -
Pumo3g02377 761 CDD PP2Cc 6 127 IPR001932 -
Pumo3g02377 761 PANTHER OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED 299 756 - -
Pumo3g02377 761 Gene3D - 3 145 IPR036457 -
Pumo3g02377 761 FunFam uncharacterized protein LOC106771884 isoform X8 493 756 - -
Pumo3g02377 761 ProSiteProfiles Protein kinase domain profile. 303 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02377 Pumo-Chr3 36086950 36099521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02377 367 759 PP2C-type Phosphatase Gene Family AT3G63340 64.557 7.47e-179 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSKL Pumo3g02377 Pkinase 3.2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02377 - - gmx:100781476 1447.95