Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02354 ATGCCAAGCACAAGAAATATGAAGCACCTCAACCTGAACCTGAACATGTGTTGTTCAAATTCAGCTACTCCTGAATATGAATCTCCTCCATTGAGCCCCATAACTAGTCCCTCACATAACAACACTCAATGTCCATCTCCTTCTTCAATTATGATAAAGAACTTCAACTCTATCTATGACCCTACCTTAACCTCTGACCACTCTTTCAGCTCCACCACCTTCTTCGAACCCGAACCGGAACCCGAACCCGCCGACTTCGCCACCGCCTTCGCCTCCCAACGCTTCTTCTTCTCCTCCCCCGGCCTCTCCAACTCCCTCGTGGAATACAACAAAACCACTCAACAACACTCACTAGTACCGTTGAGAGAAGAAGATGGTGTTGAGAAGATGAAGGAGAAGAAGGCATTGTTGTTCAAAGGGAGCGTGGCGGTGGCCACGTACTCGCCGGACCCTTACGTGGATTTCCGGCGGTCGATGCAGGAGATGGTGGAGGCGCGTCCGGAGCTGATGGACGTGAAGTCCAATTGGAAGGTCTTGCACGAGCTTCTTCTCTGCTATCTTGCGCTCAACCCAAAGAGCACTCACAAGTTCATTCTTGGAGCCTTCGCTGATCTACTCGTCAGCCTCATGTCTTTCTAG 639 0.5039 MPSTRNMKHLNLNLNMCCSNSATPEYESPPLSPITSPSHNNTQCPSPSSIMIKNFNSIYDPTLTSDHSFSSTTFFEPEPEPEPADFATAFASQRFFFSSPGLSNSLVEYNKTTQQHSLVPLREEDGVEKMKEKKALLFKGSVAVATYSPDPYVDFRRSMQEMVEARPELMDVKSNWKVLHELLLCYLALNPKSTHKFILGAFADLLVSLMSF 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02354 212 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 55 209 IPR038933 GO:0045892
Pumo3g02354 212 NCBIfam uncharacterized plant-specific domain TIGR01568 142 210 IPR006458 -
Pumo3g02354 212 ProSiteProfiles OVATE domain profile. 144 208 IPR006458 -
Pumo3g02354 212 MobiDBLite consensus disorder prediction 25 45 - -
Pumo3g02354 212 Pfam Transcriptional repressor, ovate 148 209 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02354 Pumo-Chr3 35814718 35815651 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pumo3g02354 Ovate 1.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02354 - - gmx:102663296 305.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02354 3 35814718 35815651 Pumo3g02354 3 35814718 35815651 ECH
Pumo5g02775 5 74646731 74647733 Pumo3g02354 3 35814718 35815651 PCT