Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02325 ATGCCCATCTCACTGTTTATGTGCAGAGTACTAACTCAACCCATAATAAACGTTCCTTGCAATGGGAAAAAAATGAATATGAGGCAAATTGAGAAAGAGAAAGTAGTGGTTATAATGGGAGCCACGGGAACAGGGAAGTCAAGGTTGTCCGTTGACCTAGCCACATGTTTTCCATCAGAAATCATAAACTCGGACAAAATTCAAGTCTACGAAGGTCTCGACATAGTCACAAACAAAATCTCCAAGGAAGACCAACGTGAGGTGCCGCACCACTTACTAGGAACAATAAAGCCCAACACGGATTTCACCGCCAATGATTTCTGTGACACGTCATCAGAGGCCATTGACTCAATCACAAGCCGCGAGCAGCTTCCAATCATCGTTGGAGGCTCCAACTCGTATCTCGAGGCCCTAATCGACGACGACGATTACAAGTTCCGCTCGCGCTACGATTTTCTCTGCCTCTGGGTTGACGTCGCAATGCCGGAACTTCAATCCTACGTGGCAGAGCGTGTTGACGACATGTTCCGTAACGGAATGGTGGATGAGCTGAGACCGTTTTATAGTCCGAACGGGGATTACTCGAGAGGGGTTAGGAGGGCCATTGGGGTTCCCGAATTCGACGAGTATTTTCGGAGGGAAGAGTTTGTTGACGAGGAGACAAAGCAGAGGTTGTTGGAACAAGCGATTAAGGAAGTGAAATTGAACACGTGCAAGTTGGCGATGAAGCAGTTGGGGAAGATTCATAGGCTGAGGAACGTTAAGAGATGGGAGATTCATCGCTTGGATGCCACGCCCGTGTTTCGAAAGCGTGGGGAAGAAGCGAACGAGGCGTGGAAGAAGCTGGTGGCAGAGCCTAGTGCTACGATCGTTGCTCGCTTTCTCTATAACTCAAAGAGTGCCAACGTTGTTTCTAGACATAGACTGAAACCAGCTTCAGACAGTGTTCTGGCTGCGGTAACGTGCTAG 969 0.485 MPISLFMCRVLTQPIINVPCNGKKMNMRQIEKEKVVVIMGATGTGKSRLSVDLATCFPSEIINSDKIQVYEGLDIVTNKISKEDQREVPHHLLGTIKPNTDFTANDFCDTSSEAIDSITSREQLPIIVGGSNSYLEALIDDDDYKFRSRYDFLCLWVDVAMPELQSYVAERVDDMFRNGMVDELRPFYSPNGDYSRGVRRAIGVPEFDEYFRREEFVDEETKQRLLEQAIKEVKLNTCKLAMKQLGKIHRLRNVKRWEIHRLDATPVFRKRGEEANEAWKKLVAEPSATIVARFLYNSKSANVVSRHRLKPASDSVLAAVTC 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02325 322 FunFam Adenylate isopentenyltransferase 5, chloroplastic 161 259 - -
Pumo3g02325 322 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 143 IPR027417 -
Pumo3g02325 322 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 161 259 - -
Pumo3g02325 322 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 32 295 IPR039657 -
Pumo3g02325 322 Gene3D - 32 295 IPR027417 -
Pumo3g02325 322 Pfam IPP transferase 68 141 - -
Pumo3g02325 322 Pfam IPP transferase 146 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02325 Pumo-Chr3 35426856 35428180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02325 148 295 C2H2 Transcription Factor Family AT2G27760 31.429 1.79e-20 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02325 K10760 - gmx:100803964 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02325 3 35426856 35428180 Pumo3g02325 3 35426856 35428180 ECH