Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02292 ATGACTGGAAGTAATGAAGTCAACCTCAGTGAATCTAAGAGTGTTGTTCCACTCAACACTTGGGTGCTTATCTCCAATTTCAAGCTGGCTTACAATCTACTAAGACGTGCTGATGGAACGTTCAATCGAGAGTTGGCGGAATTCCTCGACCGCAAGGTCCCGGCTAATGCAATTCCTGTTGATGGGGTATTCTCTTTTGATCATGTTGAACGTAGCACCGGCCTCTTCAATCGGGTGTATCAACTAGCTCCTGAAACCATGACTCGGTTAATAGAGCTGGAGAAGCCCTTGAGCACCACAGAGATTGTTCCTGTGATAATTTTCTTCCATGGTGGAAGCTTCTCTCATTCATCTGCTAACAGTGCTATCTATGACACTTTCTGCCGCCGCCTTGTGAGCAATTGCAAGGCTGTGGTGGTTTCTGTAAATTACAGGCGATCACCAGAGTACCGATATCCATGTGCCTATGATGATGGCTGGGCTGCGCTTAACTGGGTTAAATCTAGGACATGGCTTCAAAGTGGAAAGGATTCCAAGGTTCATGTATACTTGGCTGGTGATAGTTCAGGTGGTAATATTGCTCATCATGTGGCTGTGAGGGCTGCTGAGGAAGATATTGAGGTGCTAGGTAATATTCTTCTCCACCCACTGTTTGGTGGGGAGAAGCGAACCGAGTCAGAGAAAAAACTGGATGGGAAGTACTTTGTGAGGCTGCAAGACCGTGACTGGTATTGGAGAGCTTTTCTTCCTGAAGGGGCGGATAGAGACCACCCGGCTTGTAACCCATTTGGTCCCAAGGGTAAAAATCTTGCAGGACTCAAGTTGCCCAAGAGTCTTGTCTGTGTGGCTGGTTTGGATCTTCTCCAAGATTGGCAATTGGAATATGTGGAAGGTCTCAAGAATTGTGGCCAAGATGTCAAACTTCTTTACCTAAAGGAGGCAACTATTGGTTTCTACTTCTTGCCTAATAATGATCATTTCTATACCCTCATGGAGGAGATAAAGAACTTCGTCAACCCTAACTGTTAA 1029 0.4577 MTGSNEVNLSESKSVVPLNTWVLISNFKLAYNLLRRADGTFNRELAEFLDRKVPANAIPVDGVFSFDHVERSTGLFNRVYQLAPETMTRLIELEKPLSTTEIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVSNCKAVVVSVNYRRSPEYRYPCAYDDGWAALNWVKSRTWLQSGKDSKVHVYLAGDSSGGNIAHHVAVRAAEEDIEVLGNILLHPLFGGEKRTESEKKLDGKYFVRLQDRDWYWRAFLPEGADRDHPACNPFGPKGKNLAGLKLPKSLVCVAGLDLLQDWQLEYVEGLKNCGQDVKLLYLKEATIGFYFLPNNDHFYTLMEEIKNFVNPNC 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02292 342 FunFam Gibberellin receptor GID1 1 340 - -
Pumo3g02292 342 Pfam alpha/beta hydrolase fold 106 319 IPR013094 GO:0016787
Pumo3g02292 342 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 106 122 IPR002168 GO:0016787
Pumo3g02292 342 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 182 194 IPR033140 -
Pumo3g02292 342 SUPERFAMILY alpha/beta-Hydrolases 99 339 IPR029058 -
Pumo3g02292 342 PANTHER ARYLACETAMIDE DEACETYLASE 43 313 - -
Pumo3g02292 342 Gene3D alpha/beta hydrolase 1 339 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02292 Pumo-Chr3 35040296 35041999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02292 1 339 Carbohydrate Esterase AT3G63010 75.731 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02292 K14493 - gmx:100804463 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02292 3 35040296 35041999 Pumo3g02292 3 35040296 35041999 ECH
Pumo5g02705 5 73564624 73566111 Pumo3g02292 3 35040296 35041999 ECH
Pumo5g02705 5 73564624 73566111 Pumo3g02292 3 35040296 35041999 PCT