Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02288 ATGAAGATGAGAATTTTGGTATGTGTGGCACTTTTGGGTTTCCTTGGGGTTTGTGAAGGAGGCAGCCTAAGGAAAAACTTCTACCGGGATTCCTGCCCTCAAGCCGAGAACATTATTAAGAACAAAACCCAGCAGCATGTGTCTGCTAATCCCGATTTGCCGGCCAAGTTGCTTAGAATGCATTTTCATGATTGTTTTGTCAGGGGTTGTGATGCCTCGGTTTTGTTGAACTCTACTGCCACTAACACTGCTGAGAGGGATGCAATTCCAAATTTATCTTTGGCTGGCTTTGATGTCATTGATGACATAAAAAGTGCGGTGGAGGCTAAATGTCCCAAAACTGTATCTTGTGCTGACATACTTGCATTGGCAGTTAGGGACGCTGTTTCCGTCCAATTTAATAAATCTATGTGGGAAGTGCTGACTGGTAGAAGAGATGGCACGGTATCAAACAGTAGCGAAGCCTTGGCCAATATCCCAGCACCTTTCTTCAACTTCACCCAACTCAGACAAAGCTTTGCTAGCAAAGGTCTCACTTTGCACGATCTGGTTGTATTATCAGGGGCACACACAATAGGAATAGGGCATTGCAACTTGTTCAGTAACAGGCTTTACAATTTCACCGGGAAAGGTGATCAAGACCCTTCCTTGAACACCACTTATGCTGCATTCTTGAAGACAAAGTGCCAGAGCCTGAGTGACACAACCACAACGGTAGAAATGGATCCTGGCAGCTCTACTGATTTCGATAGTGACTATTATCCTAACCTTATACAGAATAAGGGTCTGTTCCAATCAGACGCTGCCCTTCTAACACAAGAGCAATCAATGAAGAGAATGGGAGCCATTGAGGTCCTCACTGGCACTGCCGGAGAAATACGGAACAAGTGTTCAGTTGTCAACTCATAA 909 0.4477 MKMRILVCVALLGFLGVCEGGSLRKNFYRDSCPQAENIIKNKTQQHVSANPDLPAKLLRMHFHDCFVRGCDASVLLNSTATNTAERDAIPNLSLAGFDVIDDIKSAVEAKCPKTVSCADILALAVRDAVSVQFNKSMWEVLTGRRDGTVSNSSEALANIPAPFFNFTQLRQSFASKGLTLHDLVVLSGAHTIGIGHCNLFSNRLYNFTGKGDQDPSLNTTYAAFLKTKCQSLSDTTTTVEMDPGSSTDFDSDYYPNLIQNKGLFQSDAALLTQEQSMKRMGAIEVLTGTAGEIRNKCSVVNS 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02288 302 PANTHER PEROXIDASE 25-RELATED 8 288 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g02288 302 Gene3D Peroxidase, domain 2 160 274 - -
Pumo3g02288 302 FunFam Peroxidase 26 166 - -
Pumo3g02288 302 SUPERFAMILY Heme-dependent peroxidases 23 301 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo3g02288 302 FunFam Peroxidase 160 290 - -
Pumo3g02288 302 ProSiteProfiles Plant heme peroxidase family profile. 22 301 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g02288 302 Gene3D - 27 159 - -
Pumo3g02288 302 CDD secretory_peroxidase 23 300 IPR033905 GO:0004601|GO:0042744
Pumo3g02288 302 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g02288 302 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g02288 302 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g02288 302 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g02288 302 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g02288 302 Gene3D - 281 301 - -
Pumo3g02288 302 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Pumo3g02288 302 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g02288 302 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g02288 302 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g02288 302 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g02288 302 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g02288 302 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g02288 302 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g02288 302 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g02288 302 Pfam Peroxidase 40 275 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02288 Pumo-Chr3 34980889 34982543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02288 3 302 Peroxidase AT1G05260 53.495 5.39e-115 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02288 K00430 - gmx:100799691 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03330 5 82435903 82443071 Pumo3g02288 3 34980889 34982543 PCT