Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02260 ATGGCAACAATAAAACTTCATGGAAACCCCTTCTCAACAGCCACCATGCGAGCTGCAGCTTCCCTGCACGAGAAGCAGCTTGAATTTGAGTTTGTTCTCATTGACATGAAAAATGGTGAACACAAAAAGGAACCCTTCATTTCCCTTAATCCTTTCGGTCAAGTTCCAGCCTTTGAAGACGGAGATTTGAAGCTCTTTGAATCAAGGGCAATAACTCAATACATTGTTCACGAGTATGCTGACAAGGGGACCCAACTGATAAGCAACGACTCCAAGAAGATGGCAATACTGAGGTTGTGGTTGGAAGTAGAGAGCCAAAAATACGATCAACCAGCTTCAAAACTTGTATGGGAGCTGGTGGTGAAGCCTATGTATGGTATGGCAACGGATCCAGCAGCTGTGGAAGAGAATGAAGGCAAGCTAGACACTGTTCTTGATTATTACGAGAAAACATTGTCTCAGTCCAAATACTTGGCAGGGGAGTGCTTCACCTTGGCAGATCTGCATCACCTCCCCACCATTCAGTACTTGATGAACACACAGAGCAAGAAGTTGTTTGAATCACGACCCTATGTTGGTGCATGGGTAGCTGATATTACAGCAAGACCAGCTTGGTCTAAGCTGAATCCAAATAAAATTGGTTTAGATGAAAAAAAGCATTACAATGCGCATCCGGGGAATCGAACCCCGGTCAGTACCGTGGGAGGGTACTATGATACCACTACACCAGATGCGCTTATTGGTGAAGACTCAGATTAA 759 0.4466 MATIKLHGNPFSTATMRAAASLHEKQLEFEFVLIDMKNGEHKKEPFISLNPFGQVPAFEDGDLKLFESRAITQYIVHEYADKGTQLISNDSKKMAILRLWLEVESQKYDQPASKLVWELVVKPMYGMATDPAAVEENEGKLDTVLDYYEKTLSQSKYLAGECFTLADLHHLPTIQYLMNTQSKKLFESRPYVGAWVADITARPAWSKLNPNKIGLDEKKHYNAHPGNRTPVSTVGGYYDTTTPDALIGEDSD 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02260 252 SFLD Main.5: Phi-like 1 210 - -
Pumo3g02260 252 FunFam Glutathione S-transferase F2 3 87 - -
Pumo3g02260 252 FunFam Glutathione S-transferase F2 88 209 - -
Pumo3g02260 252 CDD GST_N_Phi 3 77 - -
Pumo3g02260 252 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Pumo3g02260 252 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 231 IPR010987 -
Pumo3g02260 252 SFLD Glutathione Transferase (cytosolic) 1 210 IPR040079 -
Pumo3g02260 252 SUPERFAMILY GST C-terminal domain-like 85 207 IPR036282 -
Pumo3g02260 252 Gene3D Glutaredoxin 1 86 - -
Pumo3g02260 252 Pfam Glutathione S-transferase, N-terminal domain 3 76 IPR004045 -
Pumo3g02260 252 CDD GST_C_Phi 92 208 IPR034347 -
Pumo3g02260 252 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 208 - -
Pumo3g02260 252 SUPERFAMILY Thioredoxin-like 1 83 IPR036249 -
Pumo3g02260 252 Pfam Glutathione S-transferase, C-terminal domain 112 203 IPR004046 -
Pumo3g02260 252 Gene3D - 87 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02260 Pumo-Chr3 34554218 34557289 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02260 1 208 Glutathione S-transferase Gene Family AT1G02920 62.500 9.96e-93 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02260 K00799 - gmx:100799868 392.119