Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02226 ATGGAAAGCAAAACAAACTGCATGTCAATCTTGGTTATATGTATGTGCTTCATCTTAGTGCATTACCAAACCGGTGCCACAGAAGAAAAAACAGGCAAGGAGTTAATTGAGAGCATATGCAAAGACAGGGGAAACAATGAATTGTGCATGGAGGTCCTTTCCTCGGACCCAGACAGTGATCATGCGAACCTAAAAGACCTGGCAATGATATCACTGAAGGTGGCAGCAGCAAATGCGAGCGACATATTAATTGATTGCAAGAAAATGATTGATGACCCGACTTTGGAACCTAAAATTCAACAAGGGTTGGCTGATTGCAAGGAGAACCTGTTGGATGCAGAGAGTCAAATTCAGGATACTATTGCGTCCATATTGTCCAATGACAAGCTTGATGCTCAATTGTGGCTCAAGGCAGCCTTAGCTGCAATTGATACATGTGACGATTCCATCCCGGGTGACGATGACATTCTCTCTAGAAGGAGCGTAGCCTTTCGCCAATTGTGCAACATTGCCATCGCCATCAACAAGGCCATGATGGGCATTCATGGCTAA 552 0.4438 MESKTNCMSILVICMCFILVHYQTGATEEKTGKELIESICKDRGNNELCMEVLSSDPDSDHANLKDLAMISLKVAAANASDILIDCKKMIDDPTLEPKIQQGLADCKENLLDAESQIQDTIASILSNDKLDAQLWLKAALAAIDTCDDSIPGDDDILSRRSVAFRQLCNIAIAINKAMMGIHG 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02226 183 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 179 IPR035513 -
Pumo3g02226 183 SMART PMEI_2 31 174 IPR006501 GO:0004857
Pumo3g02226 183 Pfam Plant invertase/pectin methylesterase inhibitor 35 174 IPR006501 GO:0004857
Pumo3g02226 183 CDD PMEI-like_1 35 178 - -
Pumo3g02226 183 PANTHER PECTINESTERASE INHIBITOR-LIKE 2 178 - -
Pumo3g02226 183 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 176 IPR035513 -
Pumo3g02226 183 NCBIfam pectinesterase inhibitor domain 8 178 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02226 Pumo-Chr3 34102920 34103471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02226 29 150 Carbohydrate Esterase AT1G53840 27.481 2.16e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02226 - - gmx:100791255 297.36