Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02225 ATGGCCAACAACAAGTTACGTAATTCCCATCCAACAACAACTTCAACCTTTCTCATCCTCATCCTCTTCCTCCTACCCTCATTATTAGTCTCTGTAGCTTTCGCTGACACCCCTCCCACCACTCCGGTCTCTCCCGGAACCATTTGCAAATCCACCCCAGACCCATCTTATTGCAATTCCGTGCTCCCTCCCCAAAACGGCAACATTTACGACTATGGCCGGTTCTCGGTCAAAAAGTCCCTATCACGAGCCACCAATTTCTTGAACCTAGTTAACAGATACCTCCAACGCCGTTCCTCTCTTTCCACCCCCGCAATCCACGCGCTCGAAGATTGCCAAACCCTCTCCGAACTCAACATAGATTTTCTCTCCAGTTCCTTCCAAACGGTCAACAGAACAACTAAGTTCTTACCCACTTCACAAGCTGACGACATCCAAACCCTTCTCAGTGCCATTCTAACCAACCAACAAACCTGCTTGGAAGGCCTTCAAGCCACCGCCTCCGCTTGGCGCGTGAAGAACGGACTCTCCGTCCCGCTCTCCAACGACACCAAGCTCTACAGCGTCTCCCTAGCACTCTTCACTAAGGGGTGGGTCCCCGCCAAAGCTAATGTCACCGCGTTTCACCCAACCGCGAAACAGCTCGGGTTTCGAAACGGGCGTTTGCCGCTCAAGATGTCGAGCAGAACGCGCGCGATCTACGAGTCCGTGAGTCGGAGGAAGCTCCTTGAGGCGACGTTGGGTGACGAGGTTAAGGTGAAAGACATTGTGACGGTGAGCAAAGATGGAAGCGGGAACTTCACCACCATCAGCGACGCCATCGCCGCCGCGCCGAACAAGTCTTCCTCCACGGCGGGGTACTTTCTGATCTATGTGACCGCGGGTGTTTACGAGGAAAACGTGTCTATTGATAAGAAGAAGACGTACTTGATGATGGTTGGAGATGGCATCAACAAAACAATTATTACTGGGAATCGCAGCGTTGTTGATGGCTGGACAACCTTTAAGTCAGCAACCTTTGCGGTGGTTGGGGAAGGATTCGTGGGTGTGAATATGACAATCCGCAACACTGCCGGGGCAGAGAAGCACCAAGCGGTGGCCCTTCGCAACGGCGCAGATCTGTCTACATTTTACAGCTGCAGCTTCGAGGGGTACCAAGACACGCTGTACGCTCATTCCCTGCGACAATTCTACAGAGAATGCGACATCTACGGCACCGTCGATTTCATCTTCGGAAACGCCGCGGCGGTGTTCCAAAACTGCAACCTCTATCCTCGCCTTCCAATGAGTGGTCAATTCAACGCCATCACCGCACAGGGCCGAACGGATCCGAATCAAAACACCGGTACTTCCATCCACAACTGCACGATTCGACCAGCGGATGATTTGGCTGCCAACATCAATGCCGCTGAAACTTACCTGGGAAGGCCTTGGAAAAACTACTCCAGGACGGTTTACATGCAGAGCTTTATCGACAGTTTCATCGATTCTGCTGGGTGGCGCGAATGGAACGGTGATTTTGCTTTGAGCACTTTGTATTATGCAGAGTTTAACAACACTGGACCTGGATCTAGCACTGCCAACAGAGTCACGTGGCAGGGTTACCACGTGATTAATGCCACCGATGCTGCTAATTTTACTGTCTCTAACTTCTTGCTTGGAGATAACTGGTTGCCCCAGACCGGAGTGGCTTACGCCAGTAACTTGATATAG 1713 0.5178 MANNKLRNSHPTTTSTFLILILFLLPSLLVSVAFADTPPTTPVSPGTICKSTPDPSYCNSVLPPQNGNIYDYGRFSVKKSLSRATNFLNLVNRYLQRRSSLSTPAIHALEDCQTLSELNIDFLSSSFQTVNRTTKFLPTSQADDIQTLLSAILTNQQTCLEGLQATASAWRVKNGLSVPLSNDTKLYSVSLALFTKGWVPAKANVTAFHPTAKQLGFRNGRLPLKMSSRTRAIYESVSRRKLLEATLGDEVKVKDIVTVSKDGSGNFTTISDAIAAAPNKSSSTAGYFLIYVTAGVYEENVSIDKKKTYLMMVGDGINKTIITGNRSVVDGWTTFKSATFAVVGEGFVGVNMTIRNTAGAEKHQAVALRNGADLSTFYSCSFEGYQDTLYAHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNLYPRLPMSGQFNAITAQGRTDPNQNTGTSIHNCTIRPADDLAANINAAETYLGRPWKNYSRTVYMQSFIDSFIDSAGWREWNGDFALSTLYYAEFNNTGPGSSTANRVTWQGYHVINATDAANFTVSNFLLGDNWLPQTGVAYASNLI 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02225 570 ProSitePatterns Pectinesterase signature 2. 403 412 IPR033131 -
Pumo3g02225 570 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 47 196 IPR035513 -
Pumo3g02225 570 FunFam Pectinesterase 250 569 - -
Pumo3g02225 570 FunFam Pectinesterase 46 196 - -
Pumo3g02225 570 Pfam Plant invertase/pectin methylesterase inhibitor 47 193 IPR006501 GO:0004857
Pumo3g02225 570 SMART PMEI_2 40 193 IPR006501 GO:0004857
Pumo3g02225 570 CDD PMEI-like_3 47 198 - -
Pumo3g02225 570 Pfam Pectinesterase 257 555 IPR000070 GO:0030599|GO:0042545
Pumo3g02225 570 NCBIfam pectinesterase inhibitor domain 18 195 IPR006501 GO:0004857
Pumo3g02225 570 Gene3D Invertase/pectin methylesterase inhibitor family protein 46 196 IPR035513 -
Pumo3g02225 570 SUPERFAMILY Pectin lyase-like 254 566 IPR011050 -
Pumo3g02225 570 PANTHER PECTINESTERASE 28 559 - -
Pumo3g02225 570 Gene3D - 250 569 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02225 Pumo-Chr3 34096785 34099398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02225 17 570 Carbohydrate Esterase AT4G02330 63.333 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02225 K01051 - gmx:100790729 1012.29