Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02193 ATGGCTCGTCCAAGAGCCAACCTCATGTTCCTCCTATGCCTTCTGTGCTATTCTCTCTACGCCATTGCCGGAAAGAGCTATTACGACGTACTTCAAATACCGAAAGGCGCGTCGGAGGAGCAGATAAAGAGAGCGTACAGAAAGCTCGCGTTGAGGTACCATCCCGATAAGAACCCTGGCAACCAAGAAGCCAATAAGAGATTTGCCGAGATTAACAATGCGTATGAAGTACTCTCGGACAGCGAGAGGAGAAGCATTTACGATAGGTACGGGGAAGAGGGTTTGAAACAGCATGCTGCCGGAGGGGGCAGAGGTGGTGGAATGGGAATGGAATTCCAAGACATTTTCACCTCCTTCTTTGGGGGAGGTCCAATGGAGGAGGAAGAGAGAATTGTCAAAGGTGATGATGTGCTTGTTGATTTGGATGCAAGGCTCGAAGATTTGTACATGGGAGGTTCCTTCAAGGTTTGGAGGGAGAAAAATGTTTTTAAGCCAGCACCTGGGAAGAGACGCTGTAACTGTAGAAATGAGCTTTATCACAAGCAAATAGGTCCTGGGATGTTTCAACAGTTCACAGAGCAGGTTTGTGAGCAATGTCCAAATGTTAAATATGAAAGAGATGGTTATTTCATCACTGTTGATATTGAGAAAGGCATGCAAGATGGGCAGGAAGTGCTATTTTATGAGGATGGTGAGCCCATAATTGATGGAGAGTCTGGAGATATAAGGTTTCGTATCAGTACAGCACCCCATGACCTCTTCAGAAGGGAAGGCAACGACTTGCACACCACTGTCACTATAACACTGGTTCAAGCACTTGTCGGTTTTGAGAAGACTATTAAACACCTAGATGAGCATCTGGTGGACATAAGCGCGAAGGGAATCACAAATCCAAAGCAAGTGAGGAAGTTCAAAGGAGAGGGCATGCCACTGCATATGAGCACAAAGAAAGGAGATCTTTACGTCACGTTTGAGGTTCTATTCCCAACCTCACTAACCGAGGAGCAGAAAACAAATATAATAGCAATTCTTTGA 1035 0.456 MARPRANLMFLLCLLCYSLYAIAGKSYYDVLQIPKGASEEQIKRAYRKLALRYHPDKNPGNQEANKRFAEINNAYEVLSDSERRSIYDRYGEEGLKQHAAGGGRGGGMGMEFQDIFTSFFGGGPMEEEERIVKGDDVLVDLDARLEDLYMGGSFKVWREKNVFKPAPGKRRCNCRNELYHKQIGPGMFQQFTEQVCEQCPNVKYERDGYFITVDIEKGMQDGQEVLFYEDGEPIIDGESGDIRFRISTAPHDLFRREGNDLHTTVTITLVQALVGFEKTIKHLDEHLVDISAKGITNPKQVRKFKGEGMPLHMSTKKGDLYVTFEVLFPTSLTEEQKTNIIAIL 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02193 344 FunFam DnaJ subfamily B member 11 250 344 - -
Pumo3g02193 344 PRINTS DnaJ domain signature 63 83 IPR001623 -
Pumo3g02193 344 PRINTS DnaJ domain signature 46 61 IPR001623 -
Pumo3g02193 344 PRINTS DnaJ domain signature 83 102 IPR001623 -
Pumo3g02193 344 PRINTS DnaJ domain signature 28 46 IPR001623 -
Pumo3g02193 344 SUPERFAMILY HSP40/DnaJ peptide-binding domain 254 338 IPR008971 GO:0006457|GO:0051082
Pumo3g02193 344 Gene3D DnaJ domain 23 128 IPR036869 -
Pumo3g02193 344 Gene3D - 251 329 - -
Pumo3g02193 344 Pfam DnaJ domain 27 88 IPR001623 -
Pumo3g02193 344 SUPERFAMILY HSP40/DnaJ peptide-binding domain 132 255 IPR008971 GO:0006457|GO:0051082
Pumo3g02193 344 ProSitePatterns Nt-dnaJ domain signature. 68 87 IPR018253 -
Pumo3g02193 344 Pfam DnaJ C terminal domain 139 329 IPR002939 -
Pumo3g02193 344 FunFam DnaJ protein ERDJ3B 23 129 - -
Pumo3g02193 344 Gene3D - 129 250 - -
Pumo3g02193 344 ProSiteProfiles dnaJ domain profile. 26 91 IPR001623 -
Pumo3g02193 344 CDD DnaJ 27 80 IPR001623 -
Pumo3g02193 344 SUPERFAMILY Chaperone J-domain 23 122 IPR036869 -
Pumo3g02193 344 CDD DnaJ_C 201 332 - -
Pumo3g02193 344 SMART dnaj_3 25 83 IPR001623 -
Pumo3g02193 344 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 11 6 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02193 Pumo-Chr3 33698147 33702876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02193 27 90 C2H2 Transcription Factor Family AT1G74250 43.478 3.58e-09 56.2