Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02177 ATGGCTTCGATTCAGCGCCCGGCGAGTTCGGGATCGTCGGAGGGAGGAGGTCCGGCGGTGGACGAGAGGAAGAGGAAGCGCATGGAGTCGAACCGCGAGTCCGCTCGACGATCGCGGATGAGGAAGCAGAAGCAGATCGAAGACCTAAGCGACGAAGCGAGCCGATTGCAAGGCGAGAACGTGCGTCTGGCGCAGAGCATAAAGGCGAAGGAGGAAGCGTACGCGGAGATGGAAGCCGCGAACGACATCCTCAGAGCTCAGACCATGGAACTCGCGGACCGATTGAGGTTTCTGAACTCCATTCTCGAGATCGCCGAAGAGGTCGGCGATCAATCCTTCGAGATTCCGCAGATTCCGGATTCTCTCTTCATGCCCTGGCAGATCCCCCACCCTATGATGGCGTCGTCGACTGACATGTTCCTCCATGGAAATCAAGGCCTGTTTGCTTGA 450 0.5822 MASIQRPASSGSSEGGGPAVDERKRKRMESNRESARRSRMRKQKQIEDLSDEASRLQGENVRLAQSIKAKEEAYAEMEAANDILRAQTMELADRLRFLNSILEIAEEVGDQSFEIPQIPDSLFMPWQIPHPMMASSTDMFLHGNQGLFA 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02177 149 Coils Coil 25 87 - -
Pumo3g02177 149 MobiDBLite consensus disorder prediction 1 53 - -
Pumo3g02177 149 FunFam BZIP transcription factor 21 73 - -
Pumo3g02177 149 Pfam bZIP transcription factor 23 80 IPR004827 GO:0003700|GO:0006355
Pumo3g02177 149 PANTHER BZIP TRANSCRIPTION FACTOR 44 6 138 - -
Pumo3g02177 149 SUPERFAMILY Leucine zipper domain 23 73 IPR046347 GO:0003700|GO:0006355
Pumo3g02177 149 CDD bZIP_plant_GBF1 24 67 IPR045314 GO:0003700|GO:0006355
Pumo3g02177 149 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 26 41 IPR004827 GO:0003700|GO:0006355
Pumo3g02177 149 MobiDBLite consensus disorder prediction 18 53 - -
Pumo3g02177 149 Gene3D - 21 74 - -
Pumo3g02177 149 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 21 84 IPR004827 GO:0003700|GO:0006355
Pumo3g02177 149 SMART brlzneu 19 83 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02177 Pumo-Chr3 33512377 33513756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02177 19 140 bZIP Transcription Factor Family AT3G62420 54.032 8.97e-44 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo3g02177 bZIP_1 2.8e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02177 K25786 - gmx:778189 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03458 5 83847529 83847843 Pumo3g02177 3 33512377 33513756 PCT