Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02168 ATGCTGAGGACTATGGTGTCGGATTCTGATTCCTTGGAACACTTGATGCGGGTGATGAGAAAAATCAGACCAAGTATAATGATAGTTCTTGAGTTGGAAGCAAAGCATAACTCACTCTCCTTTGTGAATCGCTTCATTGAGGCATTGTTCTTCTATGCGGCATTTTTTGACTGCATTGACACCTGCATGAAGCAGGACTATGAGTGCAGAATGAGAATCGAGGGAATATTATCAGAAGGGATACGAAACATTGTTGCTATGGAAGATGGAGAAAGGACGGTTAGGAATGTGAAGATAGATGTTTGGAGAAGGTTCTTTGCAAGGTATAGAATGGTGGAGACTACATTTAGCGAGTCATCTTTGTACCAAGCTAACTTGGTTGCCAAAAAGTTTGCGTGTGGGAATTTCTGTACTGTGGACAGAAACGGGAAGTGTCTAATAGTTGGATGGAAGGGGACTCCAATTCATTCAATCTCAGCTTGGAAGTTTCTTTGA 495 0.4182 MLRTMVSDSDSLEHLMRVMRKIRPSIMIVLELEAKHNSLSFVNRFIEALFFYAAFFDCIDTCMKQDYECRMRIEGILSEGIRNIVAMEDGERTVRNVKIDVWRRFFARYRMVETTFSESSLYQANLVAKKFACGNFCTVDRNGKCLIVGWKGTPIHSISAWKFL 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02168 164 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 157 IPR005202 -
Pumo3g02168 164 ProSiteProfiles GRAS family profile. 1 162 IPR005202 -
Pumo3g02168 164 Pfam GRAS domain family 5 162 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02168 Pumo-Chr3 33436354 33436861 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02168 2 163 GRAS Transcription Factor Family AT3G03450 32.099 5.32e-26 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo3g02168 GRAS 1.5e-33 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02168 - - gmx:102663581 260.766