Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02167 ATGGTGAGTGATCCTTTTTCTTTCACACCTTTCAATTTCAACGAATTTCAGGGCGGTTATGGCTCTATACAAATAGAGGAGGATGTTATACTCCAGGGGGAACACGGTTTCTCTTCAACAATGGAGTTGCTGAGAGGGGTAAATACTTTTCCTACTTCTGAAGACCAAAACCAAAAGCAGCAACATGAGTTCAATTTTGATAACTTGGTGTTAGAGGAGTTCAACTTTGAACCTGTTCAGCATCAGCAACCAAAGCAGTCTCTTCAAGAAACTAAGGGACCAAAGAAGAATAAACAGGTGCTGCCATCTTCTTTAGCATCACTTGAGCTCTTGAGCAATTATGGAAGCAGGTTCAAGAGGCTAGGGAAGCAAAACATCAGCGATAATAGTGCTACTGTTGAAACTTGCGTGAGTACTCCTCAGAAGTTGTCAACTGAAGAAATAATAAGACTGGCTGGAGCAAGGTATATTCAGCACTCTACACAAAGGCATGATGATGTTTGCATCCCCATGCACCCTTATGGATTTGGTCTTGGAGTTTTATCCGAGGAAGAAAATAGAGACGTGGAACTTGCTCAGTTTCTTCTAGCAGCTGCTGAGAGGGTAGGGTGCCAACAATTTGAACGTGCCAGCATGTTACTTTCCCATTATCAGTGGAACTACTCTTCAGGTGGTGCCGTTCAGAGAGTTGTTTTTCATTTCGCTCAAGCACTACTAGAAAGAATCAAAAGAGAAACTGGAGGAAAGGTGACACTGATCAACAATTGTGAGAGAAACGAGGAAAGGAAAATAATTGAGAAGCTAAAATCCGATACCAACATGGCTGTTAAATGCCATCAAAAAATTCCTTTCAATCAAGTAATGCAGTTCGCTGGGGTGCAAGCTATAGTGGAACACGTTGCATTCCAAACCAAAATCCATCTCATAAACCTTGATATTGGATGTGGGGTGCAATGCACGGCTTTGATGCAAGCACTGGCTGAGAGGCATGAAAGGCAAGTTGAGCTTCTGAAGATAACTGCCATTGGACTTCAATGCAAGCCGAGCTAG 1050 0.4257 MVSDPFSFTPFNFNEFQGGYGSIQIEEDVILQGEHGFSSTMELLRGVNTFPTSEDQNQKQQHEFNFDNLVLEEFNFEPVQHQQPKQSLQETKGPKKNKQVLPSSLASLELLSNYGSRFKRLGKQNISDNSATVETCVSTPQKLSTEEIIRLAGARYIQHSTQRHDDVCIPMHPYGFGLGVLSEEENRDVELAQFLLAAAERVGCQQFERASMLLSHYQWNYSSGGAVQRVVFHFAQALLERIKRETGGKVTLINNCERNEERKIIEKLKSDTNMAVKCHQKIPFNQVMQFAGVQAIVEHVAFQTKIHLINLDIGCGVQCTALMQALAERHERQVELLKITAIGLQCKPS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02167 349 ProSiteProfiles GRAS family profile. 182 349 IPR005202 -
Pumo3g02167 349 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 125 343 IPR005202 -
Pumo3g02167 349 Pfam GRAS domain family 192 344 IPR005202 -
Pumo3g02167 349 MobiDBLite consensus disorder prediction 80 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02167 Pumo-Chr3 33435059 33436204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02167 180 343 GRAS Transcription Factor Family AT1G66350 29.697 1.07e-09 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo3g02167 GRAS 1.8e-22 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02167 - - gmx:100791952 350.517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02167 3 33435059 33436204 Pumo3g02167 3 33435059 33436204 ECH
Pumo5g03466 5 83905948 83907011 Pumo3g02167 3 33435059 33436204 PCT